FFCP PHASE1:Hg19::chr1:186277531..186277560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186277531..186277560,+ | |||
|coexpression_cluster_id=C287 | |coexpression_cluster_id=C287 | ||
|description=CAGE_peak_at_chr1:186277531..186277560,+ | |description=CAGE_peak_at_chr1:186277531..186277560,+ | ||
|id=chr1:186277531..186277560,+ | |id=chr1:186277531..186277560,+ | ||
|ontology_enrichment_celltype=CL:0002570!7.74e-10!8;CL:0000153!9.05e-10!9;CL:0000447!9.05e-10!9;CL:0000327!1.26e-08!14;CL:0000667!5.04e-08!6;CL:0000058!5.04e-08!6;CL:0000138!5.04e-08!6;CL:0002334!6.69e-07!12 | |ontology_enrichment_celltype=CL:0002570!7.74e-10!8;CL:0000153!9.05e-10!9;CL:0000447!9.05e-10!9;CL:0000327!1.26e-08!14;CL:0000667!5.04e-08!6;CL:0000058!5.04e-08!6;CL:0000138!5.04e-08!6;CL:0002334!6.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.36e-17;9!CL:0000447;2.36e-17;9!CL:0002570;3.95e-17;8!CL:0000138;7.95e-14;6!CL:0000327;6.33e-10;15!CL:0000135;1.01e-09;3!CL:0000388;1.01e-09;3!CL:0000499;1.68e-09;28!CL:0000569;2.28e-07;4!CL:0002549;6.39e-07;2!CL:0002617;7.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.42e-17,9;CL:0000447,2.42e-17,9;CL:0002570,3.95e-17,8;CL:0000058,8.17e-14,6;CL:0000138,8.17e-14,6;CL:0000327,6.43e-10,15;CL:0000135,8.87e-10,3;CL:0000388,8.87e-10,3;CL:0000499,1.63e-09,28;CL:0000569,2.44e-07,4;CL:0000011,2.44e-07,4;CL:0002549,8.00e-07,2;CL:0002617,8.24e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;2.28e-07;4!UBERON:0006965;2.81e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001443!6.85e-12!11;UBERON:0007023!9.69e-12!115;UBERON:0000310!1.46e-10!10;UBERON:0001013!1.49e-10!14;UBERON:0007100!2.20e-08!27 | |ontology_enrichment_uberon=UBERON:0001443!6.85e-12!11;UBERON:0007023!9.69e-12!115;UBERON:0000310!1.46e-10!10;UBERON:0001013!1.49e-10!14;UBERON:0007100!2.20e-08!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.55e-19;14!UBERON:0007846;1.01e-09;3!UBERON:0000043;1.01e-09;3!UBERON:0007845;1.01e-09;3!UBERON:0002081;3.82e-07;2!UBERON:0005629;6.39e-07;2!UBERON:0005358;6.39e-07;2!UBERON:0001886;6.39e-07;2!UBERON:0004086;6.39e-07;2!UBERON:0005282;6.39e-07;2!UBERON:0005281;6.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.81e-19,14;UBERON:0007846,8.87e-10,3;UBERON:0000043,8.87e-10,3;UBERON:0007845,8.87e-10,3;UBERON:0002081,3.77e-07,2;UBERON:0010227,3.77e-07,2;UBERON:0005629,8.00e-07,2;UBERON:0005358,8.00e-07,2;UBERON:0001886,8.00e-07,2;UBERON:0004086,8.00e-07,2;UBERON:0005282,8.00e-07,2;UBERON:0005281,8.00e-07,2 | |||
|phase1_expression=1.45342703416445,7.06531728840244,0.422863212287913,0,0,0,0,67.5940264566709,1.30592814099919,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08321545506006,3.5865569523189,4.55207716459574,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,29.6380104955344,5.0133791063589,81.9831297318262,148.718472098556,145.017191350185,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,4.03323147135999,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,150.838491437979,71.7463868174667,72.6671585218127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,2.535908257668,0,0,0,0,0,0,0,0,1.62868092146868,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,2.89562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.50051156317903,0,0,0,0,0,0,0,1.03473071292505,0,0,0,1.95801157462741,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0.306923946576125,0.280660094433074,0.512556597022804,0,0,0,0.771048469013278,3.55123450626254,4.5169935807595,0,4.06736324609857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.99497812982906,0,0,0,0,0,0,0.308097234229289,1.68854042198743,0,0,0.580066775656914,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,30.3994994828636,38.5275024763085,0,0,0,0,0,10.4499618862225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6950970868483,0,0,0,0,0,0,0,0,0,0,0,6.5751836122853,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0,0,0,4.7389934721366,0.150323419414493,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0.774050650312681,0.0730893170861856,0.164230914106418,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,3.58936512288407,0.998395002494955,2.14613024068285,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,6.4322579373603,0.662091970365432,0,0,0,0,0,0,0,0,22.7155962201028,3.97520666736664,0,0,0,0,0.747511887973863,0,3.31391244277756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,25.9703357023161,1.40227985908335,12.2057289530575,0.568209015825267,1.0062716070103,18.6860356535273,2.51724075236616,2.11723293268535,26.2688868984899,0,0,0,0,11.611773819544,0,0,0,0,0,0,0,0,0,0,2.40376993627955,2.35724642136143,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.98484471355718,0,0,0.535701835878287,0,2.42786241694653,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,2.00134323694638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,4.72248911538736,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,2.5359343655004,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,22.6466058029395,5.19151874548547,0,0,0,0.101988829741982,0,0,0,0.985123076837112,0.803892390468535,0,0,1.70587185520785,0,0.0645889098360061,0.31037357147929,0,0.190941474834495,0,1.30630048738177,0,0,0.717222053926764,0.665320713092027,0,0,0,0,0,0,0,0,5.43439242695771,0 | |phase1_expression=1.45342703416445,7.06531728840244,0.422863212287913,0,0,0,0,67.5940264566709,1.30592814099919,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08321545506006,3.5865569523189,4.55207716459574,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,29.6380104955344,5.0133791063589,81.9831297318262,148.718472098556,145.017191350185,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,4.03323147135999,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,150.838491437979,71.7463868174667,72.6671585218127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,2.535908257668,0,0,0,0,0,0,0,0,1.62868092146868,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,2.89562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.50051156317903,0,0,0,0,0,0,0,1.03473071292505,0,0,0,1.95801157462741,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0.306923946576125,0.280660094433074,0.512556597022804,0,0,0,0.771048469013278,3.55123450626254,4.5169935807595,0,4.06736324609857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.99497812982906,0,0,0,0,0,0,0.308097234229289,1.68854042198743,0,0,0.580066775656914,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,30.3994994828636,38.5275024763085,0,0,0,0,0,10.4499618862225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6950970868483,0,0,0,0,0,0,0,0,0,0,0,6.5751836122853,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0,0,0,4.7389934721366,0.150323419414493,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0.774050650312681,0.0730893170861856,0.164230914106418,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,3.58936512288407,0.998395002494955,2.14613024068285,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,6.4322579373603,0.662091970365432,0,0,0,0,0,0,0,0,22.7155962201028,3.97520666736664,0,0,0,0,0.747511887973863,0,3.31391244277756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,25.9703357023161,1.40227985908335,12.2057289530575,0.568209015825267,1.0062716070103,18.6860356535273,2.51724075236616,2.11723293268535,26.2688868984899,0,0,0,0,11.611773819544,0,0,0,0,0,0,0,0,0,0,2.40376993627955,2.35724642136143,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.98484471355718,0,0,0.535701835878287,0,2.42786241694653,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,2.00134323694638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,4.72248911538736,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,2.5359343655004,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,22.6466058029395,5.19151874548547,0,0,0,0.101988829741982,0,0,0,0.985123076837112,0.803892390468535,0,0,1.70587185520785,0,0.0645889098360061,0.31037357147929,0,0.190941474834495,0,1.30630048738177,0,0,0.717222053926764,0.665320713092027,0,0,0,0,0,0,0,0,5.43439242695771,0 | ||
|short_description=p@chr1:186277531..186277560,+ | |short_description=p@chr1:186277531..186277560,+ | ||
}} | }} |
Latest revision as of 01:30, 28 July 2015
Short description: | p@chr1:186277531..186277560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186277531..186277560, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.42e-17 | 9 |
carbohydrate secreting cell | 2.42e-17 | 9 |
mesenchymal stem cell of adipose | 3.95e-17 | 8 |
chondroblast | 8.17e-14 | 6 |
chondrocyte | 8.17e-14 | 6 |
extracellular matrix secreting cell | 6.43e-10 | 15 |
fibrocyte | 8.87e-10 | 3 |
tendon cell | 8.87e-10 | 3 |
stromal cell | 1.63e-09 | 28 |
cardiac mesenchymal cell | 2.44e-07 | 4 |
migratory trunk neural crest cell | 2.44e-07 | 4 |
fibroblast of choroid plexus | 8.00e-07 | 2 |
adipocyte of breast | 8.24e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.81e-19 | 14 |
dense regular connective tissue | 8.87e-10 | 3 |
tendon | 8.87e-10 | 3 |
regular connective tissue | 8.87e-10 | 3 |
cardiac atrium | 3.77e-07 | 2 |
future cardiac atrium | 3.77e-07 | 2 |
vascular plexus | 8.00e-07 | 2 |
ventricle of nervous system | 8.00e-07 | 2 |
choroid plexus | 8.00e-07 | 2 |
brain ventricle | 8.00e-07 | 2 |
ventricular system of brain | 8.00e-07 | 2 |
ventricular system of central nervous system | 8.00e-07 | 2 |