FFCP PHASE1:Hg19::chr1:221916028..221916038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:221916028..221916038,+ | |||
|coexpression_cluster_id=C578 | |||
|description=CAGE_peak_at_chr1:221916028..221916038,+ | |description=CAGE_peak_at_chr1:221916028..221916038,+ | ||
|id=chr1:221916028..221916038,+ | |id=chr1:221916028..221916038,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.16e-23!140;CL:0002031!9.01e-23!124;CL:0002087!3.54e-20!119;CL:0000838!5.70e-20!52;CL:0000542!1.85e-19!53;CL:0000051!1.85e-19!53;CL:0000037!7.61e-18!172;CL:0000566!7.61e-18!172;CL:0002032!4.12e-17!165;CL:0000837!4.12e-17!165;CL:0000988!3.66e-16!182;CL:0000791!1.98e-11!18;CL:0000789!1.98e-11!18;CL:0002420!1.98e-11!18;CL:0002419!1.98e-11!18;CL:0000790!1.98e-11!18;CL:0000084!2.93e-09!25;CL:0000827!2.93e-09!25;CL:0000623!1.19e-08!3;CL:0000825!1.19e-08!3;CL:0000236!9.63e-08!14;CL:0000945!9.79e-08!24;CL:0000826!9.79e-08!24;CL:0002274!2.57e-07!5;CL:0000457!2.57e-07!5;CL:0002191!2.57e-07!5;CL:0000097!2.57e-07!5;CL:0000831!2.57e-07!5;CL:0002028!2.57e-07!5 | |ontology_enrichment_celltype=CL:0000738!1.16e-23!140;CL:0002031!9.01e-23!124;CL:0002087!3.54e-20!119;CL:0000838!5.70e-20!52;CL:0000542!1.85e-19!53;CL:0000051!1.85e-19!53;CL:0000037!7.61e-18!172;CL:0000566!7.61e-18!172;CL:0002032!4.12e-17!165;CL:0000837!4.12e-17!165;CL:0000988!3.66e-16!182;CL:0000791!1.98e-11!18;CL:0000789!1.98e-11!18;CL:0002420!1.98e-11!18;CL:0002419!1.98e-11!18;CL:0000790!1.98e-11!18;CL:0000084!2.93e-09!25;CL:0000827!2.93e-09!25;CL:0000623!1.19e-08!3;CL:0000825!1.19e-08!3;CL:0000236!9.63e-08!14;CL:0000945!9.79e-08!24;CL:0000826!9.79e-08!24;CL:0002274!2.57e-07!5;CL:0000457!2.57e-07!5;CL:0002191!2.57e-07!5;CL:0000097!2.57e-07!5;CL:0000831!2.57e-07!5;CL:0002028!2.57e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.01e-36;3!CL:0000791;3.28e-16;18!CL:0000789;3.28e-16;18!CL:0002419;3.28e-16;18!CL:0000542;3.00e-15;53!CL:0000084;1.16e-11;25!CL:0000625;2.90e-10;11!CL:0000236;9.12e-09;13!CL:0000624;1.17e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.79e-36,3;CL:0000825,3.79e-36,3;CL:0000838,5.87e-26,52;CL:0000542,1.92e-25,53;CL:0000051,1.92e-25,53;CL:0000791,2.94e-16,18;CL:0000789,2.94e-16,18;CL:0002420,2.94e-16,18;CL:0002419,2.94e-16,18;CL:0000790,2.94e-16,18;CL:0000738,6.21e-15,136;CL:0002031,1.20e-14,120;CL:0002087,5.35e-13,115;CL:0002032,2.43e-12,161;CL:0000837,2.43e-12,161;CL:0000037,9.45e-12,168;CL:0000084,1.07e-11,25;CL:0000827,1.07e-11,25;CL:0000988,4.64e-11,177;CL:0000625,2.51e-10,11;CL:0000624,1.22e-08,6;CL:0000236,3.42e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000790;3.28e-16;18!CL:0000051;3.00e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:221916028..221916038,+ | |short_description=p@chr1:221916028..221916038,+ | ||
}} | }} |
Latest revision as of 04:11, 28 July 2015
Short description: | p@chr1:221916028..221916038, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:221916028..221916038, + |
Coexpression cluster: | C578_CD34_Natural_CD8_CD4_CD133_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.79e-36 | 3 |
pro-NK cell | 3.79e-36 | 3 |
lymphoid lineage restricted progenitor cell | 5.87e-26 | 52 |
lymphocyte | 1.92e-25 | 53 |
common lymphoid progenitor | 1.92e-25 | 53 |
mature alpha-beta T cell | 2.94e-16 | 18 |
alpha-beta T cell | 2.94e-16 | 18 |
immature T cell | 2.94e-16 | 18 |
mature T cell | 2.94e-16 | 18 |
immature alpha-beta T cell | 2.94e-16 | 18 |
leukocyte | 6.21e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.20e-14 | 120 |
nongranular leukocyte | 5.35e-13 | 115 |
hematopoietic oligopotent progenitor cell | 2.43e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-12 | 161 |
hematopoietic stem cell | 9.45e-12 | 168 |
T cell | 1.07e-11 | 25 |
pro-T cell | 1.07e-11 | 25 |
hematopoietic cell | 4.64e-11 | 177 |
CD8-positive, alpha-beta T cell | 2.51e-10 | 11 |
CD4-positive, alpha-beta T cell | 1.22e-08 | 6 |
B cell | 3.42e-08 | 14 |