FFCP PHASE1:Hg19::chr1:22745449..22745465,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:22745449..22745465,-
|short_description=p@chr1:22745449..22745465,-
|description=CAGE_peak_at_chr1:22745449..22745465,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:22745449..22745465,- | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr1:22745449..22745465,- | |||
|id=chr1:22745449..22745465,- | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-09!180;CL:0000057!5.92e-09!75;CL:0002620!3.33e-08!23;CL:0002579!6.32e-08!3;CL:0002580!6.77e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002548;7.85e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,9.01e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.07e-11;1 | |||
|ontology_enrichment_disease=DOID:2394!1.07e-17!14;DOID:120!3.89e-11!27;DOID:193!3.84e-10!29 | |||
|ontology_enrichment_disease_v019=DOID:3350;5.69e-22;2!DOID:2394;1.18e-18;14!DOID:6193;4.78e-12;1!DOID:2513;1.07e-11;1!DOID:3571;1.07e-11;1!DOID:120;1.23e-09;27!DOID:193;5.79e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,6.69e-22,2;DOID:2394,1.16e-18,14;DOID:6193,4.53e-12,1;DOID:2513,6.97e-12,1;DOID:3571,1.32e-11,1;DOID:120,1.22e-09,27;DOID:193,5.74e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0002118!7.41e-11!5;UBERON:0004532!7.41e-11!5;UBERON:0000992!1.94e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.07e-11;1!UBERON:0000948;9.41e-08;22!UBERON:0007100;7.68e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,9.61e-12,1;UBERON:0000948,4.04e-07,24;UBERON:0005498,4.04e-07,24;UBERON:0004140,4.04e-07,24;UBERON:0009881,4.04e-07,24;UBERON:0004141,4.04e-07,24;UBERON:0003084,4.04e-07,24;UBERON:0007005,4.04e-07,24;UBERON:0004139,4.04e-07,24;UBERON:0004291,4.04e-07,24 | |||
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| ||
|short_description=p@chr1:22745449..22745465,- | |||
}} | }} |
Latest revision as of 04:38, 28 July 2015
Short description: | p@chr1:22745449..22745465, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22745449..22745465, - |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 9.01e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 9.61e-12 | 1 |
heart | 4.04e-07 | 24 |
primitive heart tube | 4.04e-07 | 24 |
primary heart field | 4.04e-07 | 24 |
anterior lateral plate mesoderm | 4.04e-07 | 24 |
heart tube | 4.04e-07 | 24 |
heart primordium | 4.04e-07 | 24 |
cardiac mesoderm | 4.04e-07 | 24 |
cardiogenic plate | 4.04e-07 | 24 |
heart rudiment | 4.04e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 6.69e-22 | 2 |
ovarian cancer | 1.16e-18 | 14 |
epithelioid sarcoma | 4.53e-12 | 1 |
basal cell carcinoma | 6.97e-12 | 1 |
liver cancer | 1.32e-11 | 1 |
female reproductive organ cancer | 1.22e-09 | 27 |
reproductive organ cancer | 5.74e-09 | 29 |