FFCP PHASE1:Hg19::chr1:246020583..246020602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246020583..246020602,- | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr1:246020583..246020602,- | |description=CAGE_peak_at_chr1:246020583..246020602,- | ||
|id=chr1:246020583..246020602,- | |id=chr1:246020583..246020602,- | ||
|ontology_enrichment_celltype=CL:0000181!2.74e-09!12;CL:0000417!2.74e-09!12;CL:0000668!2.74e-09!12;CL:0000414!2.74e-09!12;CL:0000412!2.74e-09!12;CL:0000182!2.74e-09!12;CL:0002563!1.08e-07!4 | |ontology_enrichment_celltype=CL:0000181!2.74e-09!12;CL:0000417!2.74e-09!12;CL:0000668!2.74e-09!12;CL:0000414!2.74e-09!12;CL:0000412!2.74e-09!12;CL:0000182!2.74e-09!12;CL:0002563!1.08e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.99e-38;12!CL:0002231;1.20e-10;3!CL:0002563;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.60e-38,12;CL:0000223,9.14e-18,58;CL:0002231,1.20e-10,3;CL:0002563,1.70e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.51e-41;11!UBERON:0009497;4.35e-35;13!UBERON:0001041;1.42e-15;30!UBERON:0003104;6.18e-15;31!CL:0000223;8.50e-13;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;2.72e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.31e-12,39;DOID:305,5.49e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.11e-19!57;UBERON:0005068!9.11e-19!57;UBERON:0006241!9.11e-19!57;UBERON:0007135!9.11e-19!57;UBERON:0002020!1.54e-16!34;UBERON:0003528!1.54e-16!34;UBERON:0002616!1.89e-15!59;UBERON:0000955!7.93e-15!69;UBERON:0006238!7.93e-15!69;UBERON:0001017!4.64e-14!82;UBERON:0002791!8.71e-14!33;UBERON:0002780!1.55e-13!41;UBERON:0001890!1.55e-13!41;UBERON:0006240!1.55e-13!41;UBERON:0001893!2.37e-13!34;UBERON:0005743!2.75e-13!86;UBERON:0003080!3.50e-13!42;UBERON:0002298!7.29e-13!8;UBERON:0002619!7.97e-13!22;UBERON:0000073!8.80e-12!94;UBERON:0001016!8.80e-12!94;UBERON:0003075!1.32e-11!86;UBERON:0007284!1.32e-11!86;UBERON:0001869!2.72e-11!32;UBERON:0000956!2.99e-11!25;UBERON:0000203!2.99e-11!25;UBERON:0002346!5.61e-11!90;UBERON:0001950!1.84e-10!20;UBERON:0007023!1.76e-09!115;UBERON:0006331!1.78e-09!3;UBERON:0001896!2.62e-09!3;UBERON:0005290!2.62e-09!3;UBERON:0010096!2.62e-09!3;UBERON:0000025!3.16e-09!194;UBERON:0003056!1.26e-08!61;UBERON:0004111!1.34e-08!241;UBERON:0001242!1.08e-07!4;UBERON:0001262!1.08e-07!4;UBERON:0004786!1.08e-07!4;UBERON:0004808!1.08e-07!4;UBERON:0001277!1.08e-07!4;UBERON:0002038!1.26e-07!1;UBERON:0009661!1.26e-07!1;UBERON:0002581!1.75e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0000033!2.87e-07!123;UBERON:0002420!5.78e-07!9;UBERON:0007245!5.78e-07!9;UBERON:0010009!5.78e-07!9;UBERON:0010011!5.78e-07!9;UBERON:0000454!5.78e-07!9;UBERON:0002308!6.03e-07!9;UBERON:0000125!6.03e-07!9;UBERON:0003076!6.17e-07!15;UBERON:0003057!6.17e-07!15;UBERON:0000153!8.11e-07!129;UBERON:0007811!8.11e-07!129;UBERON:0003929!8.66e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.12e-24;19!UBERON:0006925;3.12e-24;19!UBERON:0002423;1.43e-18;25!UBERON:0002365;2.65e-14;31!UBERON:0002330;2.65e-14;31!UBERON:0002368;5.03e-13;33!UBERON:0000949;6.08e-10;43!UBERON:0001242;1.70e-08;4!UBERON:0001262;1.70e-08;4!UBERON:0004786;1.70e-08;4!UBERON:0004808;1.70e-08;4!UBERON:0001277;1.70e-08;4!UBERON:0002530;2.20e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-24,19;UBERON:0006925,3.31e-24,19;UBERON:0008836,3.31e-24,19;UBERON:0008835,5.39e-21,22;UBERON:0003894,5.39e-21,22;UBERON:0009854,4.14e-20,23;UBERON:0003929,4.68e-19,54;UBERON:0007499,1.50e-18,25;UBERON:0009497,1.50e-18,25;UBERON:0000015,1.50e-18,25;UBERON:0002423,1.50e-18,25;UBERON:0006235,1.50e-18,25;UBERON:0004161,1.50e-18,25;UBERON:0009856,7.34e-18,26;UBERON:0002365,4.49e-15,31;UBERON:0002330,4.49e-15,31;UBERON:0002368,2.05e-13,35;UBERON:0005911,1.19e-12,82;UBERON:0002530,2.77e-12,59;UBERON:0000949,1.52e-10,45;UBERON:0005172,7.27e-09,54;UBERON:0005173,7.27e-09,54;UBERON:0004921,8.86e-09,118;UBERON:0001242,1.70e-08,4;UBERON:0001262,1.70e-08,4;UBERON:0004786,1.70e-08,4;UBERON:0004808,1.70e-08,4;UBERON:0001277,1.70e-08,4;UBERON:0002417,5.07e-08,60;UBERON:0000916,5.07e-08,60;UBERON:0001007,3.54e-07,145;UBERON:0001555,3.54e-07,145;UBERON:0007026,3.54e-07,145;UBERON:0000490,4.41e-07,148 | |||
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|short_description=p@chr1:246020583..246020602,- | |short_description=p@chr1:246020583..246020602,- | ||
}} | }} |
Latest revision as of 06:03, 28 July 2015
Short description: | p@chr1:246020583..246020602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246020583..246020602, - |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.60e-38 | 12 |
endodermal cell | 9.14e-18 | 58 |
epithelial cell of prostate | 1.20e-10 | 3 |
intestinal epithelial cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.31e-24 | 19 |
digestive gland | 3.31e-24 | 19 |
liver bud | 3.31e-24 | 19 |
hepatic diverticulum | 5.39e-21 | 22 |
liver primordium | 5.39e-21 | 22 |
digestive tract diverticulum | 4.14e-20 | 23 |
gut epithelium | 4.68e-19 | 54 |
epithelial sac | 1.50e-18 | 25 |
epithelium of foregut-midgut junction | 1.50e-18 | 25 |
anatomical boundary | 1.50e-18 | 25 |
hepatobiliary system | 1.50e-18 | 25 |
foregut-midgut junction | 1.50e-18 | 25 |
septum transversum | 1.50e-18 | 25 |
sac | 7.34e-18 | 26 |
exocrine gland | 4.49e-15 | 31 |
exocrine system | 4.49e-15 | 31 |
endocrine gland | 2.05e-13 | 35 |
endo-epithelium | 1.19e-12 | 82 |
gland | 2.77e-12 | 59 |
endocrine system | 1.52e-10 | 45 |
abdomen element | 7.27e-09 | 54 |
abdominal segment element | 7.27e-09 | 54 |
subdivision of digestive tract | 8.86e-09 | 118 |
intestinal mucosa | 1.70e-08 | 4 |
wall of intestine | 1.70e-08 | 4 |
gastrointestinal system mucosa | 1.70e-08 | 4 |
gastrointestinal system epithelium | 1.70e-08 | 4 |
intestinal epithelium | 1.70e-08 | 4 |
abdominal segment of trunk | 5.07e-08 | 60 |
abdomen | 5.07e-08 | 60 |
digestive system | 3.54e-07 | 145 |
digestive tract | 3.54e-07 | 145 |
primitive gut | 3.54e-07 | 145 |
unilaminar epithelium | 4.41e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.31e-12 | 39 |
carcinoma | 5.49e-07 | 106 |