FFCP PHASE1:Hg19::chr1:246023808..246023820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246023808..246023820,- | |||
|description=CAGE_peak_at_chr1:246023808..246023820,- | |description=CAGE_peak_at_chr1:246023808..246023820,- | ||
|id=chr1:246023808..246023820,- | |id=chr1:246023808..246023820,- | ||
Latest revision as of 06:03, 28 July 2015
| Short description: | p@chr1:246023808..246023820, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:246023808..246023820, - |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:246023808..246023820- |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 1.45e-23 | 15 |
| preadipocyte | 3.92e-23 | 12 |
| omentum preadipocyte | 1.76e-18 | 3 |
| enteric smooth muscle cell | 2.81e-18 | 3 |
| smooth muscle cell of large intestine | 2.81e-18 | 3 |
| smooth muscle cell of colon | 2.81e-18 | 3 |
| adipocyte of omentum tissue | 3.77e-18 | 3 |
| mesenchymal stem cell of adipose | 5.89e-18 | 8 |
| multi fate stem cell | 1.62e-09 | 427 |
| somatic stem cell | 2.69e-09 | 433 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| omentum | 7.80e-35 | 6 |
| peritoneum | 7.80e-35 | 6 |
| abdominal cavity | 7.80e-35 | 6 |
| visceral peritoneum | 7.80e-35 | 6 |
| adipose tissue | 1.95e-19 | 14 |
| cavity lining | 3.62e-17 | 12 |
| serous membrane | 3.62e-17 | 12 |
| mesenchyme of umbilical cord | 3.04e-09 | 6 |
Showing 1 to 8 of 8 entries
