FFCP PHASE1:Hg19::chr1:3624092..3624153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:3624092..3624153,+ | |||
|description=CAGE_peak_at_chr1:3624092..3624153,+ | |description=CAGE_peak_at_chr1:3624092..3624153,+ | ||
|id=chr1:3624092..3624153,+ | |id=chr1:3624092..3624153,+ | ||
|ontology_enrichment_celltype=CL:0000223!9.17e-13!59;CL:0002076!1.56e-12!43;CL:0002251!4.04e-12!21;CL:0000066!1.61e-08!254;CL:0002159!6.21e-08!13;CL:0002322!2.56e-07!5 | |ontology_enrichment_celltype=CL:0000223!9.17e-13!59;CL:0002076!1.56e-12!43;CL:0002251!4.04e-12!21;CL:0000066!1.61e-08!254;CL:0002159!6.21e-08!13;CL:0002322!2.56e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002251;3.22e-14;20!CL:0002623;8.16e-11;3!CL:0000622;8.52e-11;5!CL:0000154;5.54e-09;6!CL:0002076;8.06e-09;42!CL:0000575;2.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,3.11e-14,20;CL:0002076,4.97e-11,42;CL:0002623,8.17e-11,3;CL:0000622,8.53e-11,5;CL:0000154,5.55e-09,6;CL:0000223,2.66e-08,58;CL:0000575,2.01e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.87e-07;2!UBERON:0010056;2.87e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!5.79e-10!14;DOID:4362!5.85e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.53e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.53e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.12e-14!21;UBERON:0001004!1.55e-13!72;UBERON:0000161!1.04e-12!35;UBERON:0000165!1.64e-11!28;UBERON:0000930!1.64e-11!28;UBERON:0004119!6.04e-11!169;UBERON:0000925!6.04e-11!169;UBERON:0006595!6.04e-11!169;UBERON:0001044!2.82e-10!6;UBERON:0003293!2.82e-10!6;UBERON:0003294!2.82e-10!6;UBERON:0010047!2.82e-10!6;UBERON:0000167!2.82e-10!6;UBERON:0003408!5.62e-10!10;UBERON:0000974!1.20e-09!10;UBERON:0000344!9.72e-09!12;UBERON:0003729!1.02e-08!5;UBERON:0001007!1.22e-08!155;UBERON:0001555!1.22e-08!155;UBERON:0007026!1.22e-08!155;UBERON:0001041!1.58e-08!98;UBERON:0004921!2.37e-08!129;UBERON:0004185!2.37e-08!129;UBERON:0000002!2.66e-08!6;UBERON:0001560!2.66e-08!6;UBERON:0000078!1.17e-07!18;UBERON:0000065!2.08e-07!53;UBERON:0000077!3.62e-07!130;UBERON:0003343!3.71e-07!4;UBERON:0004785!3.71e-07!4;UBERON:0000365!4.51e-07!5;UBERON:0006562!8.09e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.66e-18;28!UBERON:0001044;3.49e-18;6!UBERON:0003293;3.49e-18;6!UBERON:0003294;3.49e-18;6!UBERON:0010047;3.49e-18;6!UBERON:0003408;3.49e-18;6!UBERON:0000167;3.49e-18;6!UBERON:0000161;1.58e-17;19!UBERON:0000166;1.58e-17;19!UBERON:0001041;5.13e-13;14!UBERON:0000974;7.50e-13;6!UBERON:0000153;2.68e-10;54!UBERON:0001723;6.71e-10;3!UBERON:0001033;6.71e-10;3!UBERON:0007811;9.08e-10;52!UBERON:0000033;3.93e-08;50!UBERON:0003343;6.45e-08;4!UBERON:0004785;6.45e-08;4!UBERON:0001444;1.54e-07;48!UBERON:0006562;2.50e-07;2!UBERON:0003127;4.80e-07;2!UBERON:0002370;6.47e-07;2!UBERON:0005058;6.47e-07;2!UBERON:0009113;6.47e-07;2!UBERON:0003126;7.55e-07;7!UBERON:0001005;7.55e-07;7!UBERON:0001555;9.26e-07;54!UBERON:0000341;9.49e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,6.07e-21,22;UBERON:0003408,2.20e-18,10;UBERON:0001044,3.55e-18,6;UBERON:0003293,3.55e-18,6;UBERON:0003294,3.55e-18,6;UBERON:0010047,3.55e-18,6;UBERON:0000167,3.55e-18,6;UBERON:0000165,9.03e-18,29;UBERON:0000930,9.03e-18,29;UBERON:0000153,2.78e-16,62;UBERON:0007811,2.78e-16,62;UBERON:0000974,3.57e-14,10;UBERON:0000161,1.84e-13,36;UBERON:0006562,8.49e-13,11;UBERON:0001004,2.19e-12,74;UBERON:0001444,2.57e-12,49;UBERON:0000033,1.07e-11,56;UBERON:0001042,1.83e-10,10;UBERON:0009145,1.83e-10,10;UBERON:0001723,6.24e-10,3;UBERON:0001033,6.24e-10,3;UBERON:0010056,6.24e-10,3;UBERON:0003102,2.89e-09,99;UBERON:0003343,6.46e-08,4;UBERON:0004785,6.46e-08,4;UBERON:0001041,1.03e-07,87;UBERON:0004119,2.06e-07,160;UBERON:0000925,2.06e-07,160;UBERON:0006595,2.06e-07,160;UBERON:0003127,4.87e-07,2;UBERON:0000341,8.32e-07,2;UBERON:0003126,9.20e-07,7;UBERON:0001005,9.20e-07,7 | |||
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|short_description=p@chr1:3624092..3624153,+ | |short_description=p@chr1:3624092..3624153,+ | ||
}} | }} |
Latest revision as of 07:42, 28 July 2015
Short description: | p@chr1:3624092..3624153, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:3624092..3624153, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 3.11e-14 | 20 |
endo-epithelial cell | 4.97e-11 | 42 |
acinar cell of salivary gland | 8.17e-11 | 3 |
acinar cell | 8.53e-11 | 5 |
protein secreting cell | 5.55e-09 | 6 |
endodermal cell | 2.66e-08 | 58 |
corneal epithelial cell | 2.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 6.07e-21 | 22 |
gland of gut | 2.20e-18 | 10 |
saliva-secreting gland | 3.55e-18 | 6 |
gland of oral region | 3.55e-18 | 6 |
gland of foregut | 3.55e-18 | 6 |
oral gland | 3.55e-18 | 6 |
oral cavity | 3.55e-18 | 6 |
mouth | 9.03e-18 | 29 |
stomodeum | 9.03e-18 | 29 |
anterior region of body | 2.78e-16 | 62 |
craniocervical region | 2.78e-16 | 62 |
neck | 3.57e-14 | 10 |
orifice | 1.84e-13 | 36 |
pharynx | 8.49e-13 | 11 |
respiratory system | 2.19e-12 | 74 |
subdivision of head | 2.57e-12 | 49 |
head | 1.07e-11 | 56 |
chordate pharynx | 1.83e-10 | 10 |
pharyngeal region of foregut | 1.83e-10 | 10 |
tongue | 6.24e-10 | 3 |
gustatory system | 6.24e-10 | 3 |
future tongue | 6.24e-10 | 3 |
surface structure | 2.89e-09 | 99 |
mucosa of oral region | 6.46e-08 | 4 |
respiratory system mucosa | 6.46e-08 | 4 |
foregut | 1.03e-07 | 87 |
endoderm-derived structure | 2.06e-07 | 160 |
endoderm | 2.06e-07 | 160 |
presumptive endoderm | 2.06e-07 | 160 |
open tracheal system trachea | 4.87e-07 | 2 |
throat | 8.32e-07 | 2 |
trachea | 9.20e-07 | 7 |
respiratory airway | 9.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.53e-10 | 14 |