FFCP PHASE1:Hg19::chr1:68297749..68297781,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:68297749..68297781,- to FFCP PHASE1:Hg19::chr1:68297749..68297781,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:68297749..68297781,- | |||
|description=CAGE_peak_at_chr1:68297749..68297781,- | |||
|id=chr1:68297749..68297781,- | |||
|ontology_enrichment_celltype=CL:0002139!4.79e-15!24;CL:0000213!2.21e-12!57;CL:0000215!2.21e-12!57;CL:0000071!2.05e-11!18;CL:0002546!2.05e-11!18;CL:0000222!3.11e-11!119;CL:0000115!1.79e-09!35;CL:0002078!4.64e-09!44;CL:0000076!4.60e-08!62;CL:1000413!4.68e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.32e-33;24!CL:0000071;3.79e-25;18!CL:0000115;4.87e-24;36!CL:1000413;6.06e-20;9!CL:0002078;4.74e-18;45!CL:0002544;1.07e-13;6!CL:0000213;9.80e-13;58!CL:0000215;9.80e-13;58!CL:0002138;9.71e-10;6!CL:0002618;8.88e-07;3!CL:0000076;9.59e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.99e-34,24;CL:0000115,5.19e-28,36;CL:0002078,1.98e-27,45;CL:0000071,2.12e-25,18;CL:0002546,2.12e-25,18;CL:0000213,2.76e-23,58;CL:0000215,2.76e-23,58;CL:1000413,3.00e-20,9;CL:0002544,6.39e-14,6;CL:0000222,1.16e-12,121;CL:0005020,6.72e-10,6;CL:0002138,6.72e-10,6;CL:0005022,6.72e-10,6;CL:0000076,7.65e-10,63 | |||
|ontology_enrichment_development_v019=CL:0002546;3.79e-25;18!CL:0005022;9.71e-10;6!UBERON:0007123;3.80e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.05e-11!18;UBERON:0004638!2.05e-11!18;UBERON:0004852!2.05e-11!18;UBERON:0006914!1.36e-09!25;UBERON:0000477!1.45e-09!286;UBERON:0002049!2.77e-09!79;UBERON:0007798!2.77e-09!79;UBERON:0000055!9.28e-09!69;UBERON:0000487!1.25e-08!22;UBERON:0000119!2.12e-08!312;UBERON:0000490!2.22e-08!138;UBERON:0003915!4.68e-08!9;UBERON:0004700!4.68e-08!9;UBERON:0001917!4.68e-08!9;UBERON:0000483!6.77e-08!309;UBERON:0001981!1.90e-07!60;UBERON:0007500!1.90e-07!60;UBERON:0004537!1.90e-07!60;UBERON:0006965!1.90e-07!60;UBERON:0004872!2.29e-07!84;UBERON:0000481!6.22e-07!347;UBERON:0000468!6.73e-07!659;UBERON:0000467!7.55e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.79e-25;18!UBERON:0001986;3.79e-25;18!UBERON:0004852;3.79e-25;18!UBERON:0003915;6.06e-20;9!UBERON:0004700;6.06e-20;9!UBERON:0001917;6.06e-20;9!UBERON:0000487;8.97e-20;22!UBERON:0006914;1.66e-19;25!UBERON:0000490;3.68e-12;33!UBERON:0000055;9.76e-10;65!UBERON:0007500;3.71e-08;56!UBERON:0001981;3.71e-08;56!UBERON:0004537;3.71e-08;56!UBERON:0001473;3.67e-07;8!UBERON:0004536;3.67e-07;8!UBERON:0006558;3.67e-07;8!UBERON:0002046;3.80e-07;5!UBERON:0000947;4.65e-07;21!UBERON:0010191;4.65e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.12e-25,18;UBERON:0001986,2.12e-25,18;UBERON:0004852,2.12e-25,18;UBERON:0003915,3.00e-20,9;UBERON:0004700,3.00e-20,9;UBERON:0001917,3.00e-20,9;UBERON:0000487,5.65e-20,22;UBERON:0006914,1.05e-19,25;UBERON:0000055,1.65e-16,68;UBERON:0002049,2.14e-13,78;UBERON:0007798,2.14e-13,78;UBERON:0007500,3.36e-12,59;UBERON:0001981,3.36e-12,59;UBERON:0004537,3.36e-12,59;UBERON:0006965,3.36e-12,59;UBERON:0004872,6.57e-11,83;UBERON:0004535,3.92e-09,109;UBERON:0001009,1.09e-08,112;UBERON:0003914,1.78e-08,117;UBERON:0001473,2.81e-07,8;UBERON:0004536,2.81e-07,8;UBERON:0006558,2.81e-07,8;UBERON:0002046,2.82e-07,5;UBERON:0004117,2.82e-07,5;UBERON:0007689,2.82e-07,5;UBERON:0007123,2.82e-07,5;UBERON:0003091,2.82e-07,5;UBERON:0000947,3.56e-07,21;UBERON:0010191,3.56e-07,21;UBERON:0001637,3.61e-07,42;UBERON:0003509,3.61e-07,42;UBERON:0004572,3.61e-07,42 | |||
|phase1_expression=1.81678379270557,0.856402095563933,1.26858963686374,2.00146596706261,0.446961094427288,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0.37129905888014,0.994192127183747,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.722878304769133,0.50133791063589,1.30361867064741,0,0.486634870302636,0.756278537312543,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,1.98762407366705,3.4409383804245,3.12426451446835,2.26123176769604,5.87299210693868,4.12677062910101,2.71693456497854,6.20200222006389,11.028754143288,10.3763389957048,3.22263453687318,0.760272105718513,2.68468263302986,5.51494620518803,4.0507097394088,2.41109266367015,1.34717623575702,1.12611480483322,0,0.949265659568129,2.38162267109529,0,0,0,0,0.759783069987479,0.264818361626438,0.286836620748814,0.354668382198357,2.24271040056923,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0.605429710579726,0.576175924479999,0,0.312160076830321,0.570471821544449,0.448346041655403,0.469737994575059,0.485618833104395,0.280901613404497,0,0.61417158655884,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0,0,0.300476117813194,0.567160915800105,0,0,0.211931901159562,0,0.515262646192195,0,0.18611685633159,0.506328996723799,0.194874010322397,0.504867548488229,0.0920498986422993,0.969876340912871,0,0.403008392910561,0.169560592310488,0.193260853163297,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.482022059766964,0.220587945464788,0,0.237270619111097,0.539325232640658,0.392442930250692,0,4.42893272774789,0,0,0,0,0,1.77236972004421,0,0.245976877086227,0.514703430895577,0.219500570817251,1.1240175325762,0.100528972411631,0.185176890317059,0.325808305310325,0,1.44331342025273,0.34779121492523,0.70445216541493,2.30986316417718,0.462985512576611,1.71228737011138,0,0,0.246217006087397,0,0,0,0.503946384596579,0.141775097242386,0.179117045405697,0.581267877027924,0.766765358330422,0,0,0,0,0,0.444485260045183,0.763976851116555,1.17217447210047,0,0.411309970813294,1.50171528921959,0.571652865261156,0.560655421726804,0.43596006883328,0.80672114403045,0.129271715757778,0,0,0.26593811658487,3.12022310734098,0,0,0.266422179016099,0.57191197463259,1.62786481617433,0,0.65147236858747,0,0.791951872933429,0.602878754119172,0,0.399891964728228,0,0,0,0.718874566474748,0,0,0.868687840005475,1.2328579353023,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,1.03985430765404,0.892144943985809,0.473107245101804,1.05427273493442,1.50473049863859,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0.744323423456331,0.153461973288062,0,0.512556597022804,1.53512174720011,0.321707842287215,0,0.154209693802656,0,0.657017248110473,0.519254429183621,0.464841513839837,0,0,0.184161977871793,0.229628896329213,0.910455840033585,0.655622074797121,0,0.308061348417659,0,0,0.105551628892876,2.27466768141793,2.72149928442425,0.431831832204279,0,0.270946437543853,0,1.01950509218015,0,0,0,0,0,0.328014645699706,0.650756789328606,1.03041011647722,0.0915694648183434,0,0,0,0,0.193341436584244,0.770243085573222,0.614014698904518,0.827019434907183,0.537101224341368,0.725083469571143,0.426133137080504,0.356128142586949,0.495854746082934,0.192190067365106,0.255225424989168,0,2.32422774648643,0.62962469366128,0,0,2.12922412126809,0.869932992075073,0.55597265731176,1.00187420719394,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0.682499557039929,0.141405431953713,0,2.2054613741845,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0.294747123039363,0,0.354761064070598,0.633322905892992,3.62224382255892,0,0,0.192444225451024,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0.333926115068718,0,1.05562704063997,1.59398390600856,0.276283915531148,1.0077309914171,0.102268682502155,0,0.311039587661807,0.0898683511473268,0.358042349351218,0,0.887790650732402,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.568967241427498,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0.219385397153973,1.63407695278485,0.139423744278603,2.07765697960252,0.227884111694002,0.23056390438806,0.269272933229316,0,0.957003479195758,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0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| ||
|short_description=p@chr1:68297749..68297781,- | |||
}} | }} |
Latest revision as of 10:05, 28 July 2015
Short description: | p@chr1:68297749..68297781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:68297749..68297781, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.99e-34 | 24 |
endothelial cell | 5.19e-28 | 36 |
meso-epithelial cell | 1.98e-27 | 45 |
blood vessel endothelial cell | 2.12e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.12e-25 | 18 |
lining cell | 2.76e-23 | 58 |
barrier cell | 2.76e-23 | 58 |
endothelial cell of artery | 3.00e-20 | 9 |
aortic endothelial cell | 6.39e-14 | 6 |
mesodermal cell | 1.16e-12 | 121 |
lymphangioblast | 6.72e-10 | 6 |
endothelial cell of lymphatic vessel | 6.72e-10 | 6 |
vascular lymphangioblast | 6.72e-10 | 6 |
squamous epithelial cell | 7.65e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.12e-25 | 18 |
endothelium | 2.12e-25 | 18 |
cardiovascular system endothelium | 2.12e-25 | 18 |
endothelial tube | 3.00e-20 | 9 |
arterial system endothelium | 3.00e-20 | 9 |
endothelium of artery | 3.00e-20 | 9 |
simple squamous epithelium | 5.65e-20 | 22 |
squamous epithelium | 1.05e-19 | 25 |
vessel | 1.65e-16 | 68 |
vasculature | 2.14e-13 | 78 |
vascular system | 2.14e-13 | 78 |
epithelial tube open at both ends | 3.36e-12 | 59 |
blood vessel | 3.36e-12 | 59 |
blood vasculature | 3.36e-12 | 59 |
vascular cord | 3.36e-12 | 59 |
splanchnic layer of lateral plate mesoderm | 6.57e-11 | 83 |
cardiovascular system | 3.92e-09 | 109 |
circulatory system | 1.09e-08 | 112 |
epithelial tube | 1.78e-08 | 117 |
lymphatic vessel | 2.81e-07 | 8 |
lymph vasculature | 2.81e-07 | 8 |
lymphatic part of lymphoid system | 2.81e-07 | 8 |
thyroid gland | 2.82e-07 | 5 |
pharyngeal pouch | 2.82e-07 | 5 |
thyroid diverticulum | 2.82e-07 | 5 |
pharyngeal pouch 2 | 2.82e-07 | 5 |
thyroid primordium | 2.82e-07 | 5 |
aorta | 3.56e-07 | 21 |
aortic system | 3.56e-07 | 21 |
artery | 3.61e-07 | 42 |
arterial blood vessel | 3.61e-07 | 42 |
arterial system | 3.61e-07 | 42 |