FFCP PHASE1:Hg19::chr20:30307217..30307248,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:30307217..30307248,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr20:30307217..30307248,- | |description=CAGE_peak_at_chr20:30307217..30307248,- | ||
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|ontology_enrichment_celltype=CL:0000066!2.66e-24!254;CL:0000223!1.02e-16!59;CL:0002076!1.30e-16!43;CL:0002368!4.51e-10!13;CL:0002159!1.25e-07!13;CL:0002202!1.41e-07!9;CL:0002632!1.41e-07!9 | |ontology_enrichment_celltype=CL:0000066!2.66e-24!254;CL:0000223!1.02e-16!59;CL:0002076!1.30e-16!43;CL:0002368!4.51e-10!13;CL:0002159!1.25e-07!13;CL:0002202!1.41e-07!9;CL:0002632!1.41e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002202;1.91e-10;9!CL:0002632;1.91e-10;9!CL:0002577;2.19e-10;3!CL:0000312;8.12e-10;5!CL:0000349;4.83e-09;19!CL:0000240;3.57e-08;6!CL:0000311;3.57e-08;6!CL:0000079;3.57e-08;6!CL:0000237;3.57e-08;6!CL:0002076;3.31e-07;42!CL:0002536;4.04e-07;2!CL:0002159;4.75e-07;14!CL:0002368;5.03e-07;13!CL:0000764;6.87e-07;2!CL:0000558;6.87e-07;2!CL:0000575;6.97e-07;2 | |ontology_enrichment_celltype_v019=CL:0002202;1.91e-10;9!CL:0002632;1.91e-10;9!CL:0002577;2.19e-10;3!CL:0000312;8.12e-10;5!CL:0000349;4.83e-09;19!CL:0000240;3.57e-08;6!CL:0000311;3.57e-08;6!CL:0000079;3.57e-08;6!CL:0000237;3.57e-08;6!CL:0002076;3.31e-07;42!CL:0002536;4.04e-07;2!CL:0002159;4.75e-07;14!CL:0002368;5.03e-07;13!CL:0000764;6.87e-07;2!CL:0000558;6.87e-07;2!CL:0000575;6.97e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.35e-14,253;CL:0002202,2.11e-10,9;CL:0002632,2.11e-10,9;CL:0002577,2.20e-10,3;CL:0000312,9.37e-10,5;CL:0000349,3.88e-09,19;CL:0000223,1.75e-08,58;CL:0002076,2.06e-08,42;CL:0000240,4.01e-08,6;CL:0000311,4.01e-08,6;CL:0000079,4.01e-08,6;CL:0000237,4.01e-08,6;CL:0000036,4.01e-08,6;CL:0000357,4.01e-08,6;CL:0000114,4.01e-08,6;CL:0002536,3.82e-07,2;CL:0002368,5.38e-07,13;CL:0002159,6.01e-07,14;CL:0000764,7.53e-07,2;CL:0000765,7.53e-07,2;CL:0000050,7.53e-07,2;CL:0000038,7.53e-07,2;CL:0000558,7.53e-07,2;CL:0000547,7.53e-07,2;CL:0000549,7.53e-07,2;CL:0000550,7.53e-07,2;CL:0000552,7.53e-07,2;CL:0002327,9.56e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;3.57e-08;6!CL:0000114;3.57e-08;6 | |ontology_enrichment_development_v019=CL:0000357;3.57e-08;6!CL:0000114;3.57e-08;6 | ||
|ontology_enrichment_disease=DOID:305!2.69e-14!106;DOID:0050687!1.45e-10!143;DOID:1749!1.41e-07!14;DOID:299!3.95e-07!25 | |ontology_enrichment_disease=DOID:305!2.69e-14!106;DOID:0050687!1.45e-10!143;DOID:1749!1.41e-07!14;DOID:299!3.95e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.59e-09;25!DOID:3493;2.65e-07;2 | |ontology_enrichment_disease_v019=DOID:299;1.59e-09;25!DOID:3493;2.65e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:299,1.49e-09,25;DOID:3493,2.58e-07,2;DOID:4468,8.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.05e-14!169;UBERON:0000925!2.05e-14!169;UBERON:0006595!2.05e-14!169;UBERON:0000077!8.49e-13!130;UBERON:0005631!3.08e-10!14;UBERON:0000158!3.08e-10!14;UBERON:0005911!9.42e-10!82;UBERON:0001007!1.72e-09!155;UBERON:0001555!1.72e-09!155;UBERON:0007026!1.72e-09!155;UBERON:0004921!3.23e-09!129;UBERON:0004185!3.23e-09!129;UBERON:0001041!4.94e-09!98;UBERON:0001004!1.03e-08!72;UBERON:0000178!3.36e-08!15;UBERON:0000179!3.36e-08!15;UBERON:0000463!3.36e-08!15;UBERON:0000466!5.11e-08!126;UBERON:0005153!5.77e-08!37;UBERON:0003124!1.06e-07!7;UBERON:0000464!1.25e-07!104;UBERON:0005157!1.71e-07!51 | |ontology_enrichment_uberon=UBERON:0004119!2.05e-14!169;UBERON:0000925!2.05e-14!169;UBERON:0006595!2.05e-14!169;UBERON:0000077!8.49e-13!130;UBERON:0005631!3.08e-10!14;UBERON:0000158!3.08e-10!14;UBERON:0005911!9.42e-10!82;UBERON:0001007!1.72e-09!155;UBERON:0001555!1.72e-09!155;UBERON:0007026!1.72e-09!155;UBERON:0004921!3.23e-09!129;UBERON:0004185!3.23e-09!129;UBERON:0001041!4.94e-09!98;UBERON:0001004!1.03e-08!72;UBERON:0000178!3.36e-08!15;UBERON:0000179!3.36e-08!15;UBERON:0000463!3.36e-08!15;UBERON:0000466!5.11e-08!126;UBERON:0005153!5.77e-08!37;UBERON:0003124!1.06e-07!7;UBERON:0000464!1.25e-07!104;UBERON:0005157!1.71e-07!51 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.64e-12;15!UBERON:0000179;3.64e-12;15!UBERON:0000463;3.64e-12;15!UBERON:0001987;7.27e-08;4!UBERON:0005631;2.87e-07;10!UBERON:0000158;2.87e-07;10!UBERON:0002370;2.90e-07;2!UBERON:0005058;2.90e-07;2!UBERON:0009113;2.90e-07;2!UBERON:0000305;3.37e-07;7!UBERON:0002390;6.02e-07;32!UBERON:0002394;7.07e-07;4!UBERON:0003928;7.07e-07;4!UBERON:0000478;7.46e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.64e-12;15!UBERON:0000179;3.64e-12;15!UBERON:0000463;3.64e-12;15!UBERON:0001987;7.27e-08;4!UBERON:0005631;2.87e-07;10!UBERON:0000158;2.87e-07;10!UBERON:0002370;2.90e-07;2!UBERON:0005058;2.90e-07;2!UBERON:0009113;2.90e-07;2!UBERON:0000305;3.37e-07;7!UBERON:0002390;6.02e-07;32!UBERON:0002394;7.07e-07;4!UBERON:0003928;7.07e-07;4!UBERON:0000478;7.46e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.97e-13,14;UBERON:0000158,5.97e-13,14;UBERON:0000178,3.48e-12,15;UBERON:0000179,3.48e-12,15;UBERON:0000463,3.48e-12,15;UBERON:0001987,7.30e-08,4;UBERON:0004340,7.30e-08,4;UBERON:0003124,2.57e-07,7;UBERON:0000305,3.07e-07,7;UBERON:0000478,6.32e-07,24;UBERON:0001911,9.56e-07,4;UBERON:0005333,9.56e-07,4;UBERON:0008425,9.56e-07,4;UBERON:0005311,9.56e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.96587149201207,3.48900583986214,3.9319446983431,3.16520373874144,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,3.67768489791571,1.50602959389125,0.739508020333575,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,8.37879163072847,1.11235332835329,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.90922284413584,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,3.07300799144152,5.62008766288098,3.01586917234893,0.370353780634118,0,0,0,0.231860809950154,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0.503946384596579,0.850650583454319,1.52249488594842,1.45316969256981,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,7.88131685760275,13.3148351608398,7.55975733324201,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.966875596732978,0.200506470303285,2.02578175658972,0,0,0,2.25599806453706,0.770153371044148,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,2.29388645740534,0.831076008928724,0,2.19259876645935,2.0914836081992,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53955380360819,0,1.08890984861323,0,1.72202149068492,1.68471475667626,0.886860307073351,0.229723400206959,18.2681139323581,10.7049208999933,9.68400218196076,1.42939065274673,0.822724546172388,7.78167973431261,14.040817368191,15.8625035258854,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,2.86493381685228,0.296964680832639,8.29333895667927,0,0.140669416410513,0,0,0,0,0,0,0,0.246169610922139,0,3.32512899245109,1.79021174675609,0,0,2.3948309234694,0,0,0,0,1.30213880542617,1.74919999992391,0,0.1137934482855,1.01701460117107,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.83654246567162,0.230850775511391,0,1.38338342632836,0.538545866458633,0.760531603454056,1.91400695839152,0.0915975934018623,0.533034776018635,0,0,0,0.225595660617181,0,0.335643173951685,0,0,2.10998064528027,1.95879369790977,3.8165329287164,0,0,0,0,0,0.247127877893006,0.417687798021821,0.067401132980677,0,0,0,2.54364004611717,0.242780379534093,0,0,0,0.126373159256976,0,0,1.99396161812156,0,0.313932918407225,1.19472429772959,0.569219092059585,0,5.0332324117188,0.979923974143776,2.08942095792966,0,0.171986032471617,0,0.0730893170861856,0,0.193978032976839,0.0882561266915003,1.35588444468319,0,0,0,1.17330829640882,0.320635281006135,0.85381197895741,0,0,0.343609788497747,0,0.288109595976299,0.372757606696298,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0.798716001995964,0,0,0.134366944973453,0,1.16495949527454,0.0787831823072236,0.329663433524666,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0.575745591958336,0,0,0,0,0,0,0,0.410462603746695,0.170388021785422,0,0,0,0,0,0.684347351537318,0,0.106787412567695,0.943225830597996,0,0,0,0.730755590285376,0,0,0,0,0,1.25643277000187,0,0,0,0,0.221858103073705,0,0.138348634936231,0.124980407962107,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0.327130788511688,0,0,1.26787274015176,0.59996218756479,0,0,0,0,1.11903606175556,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.366857197043358,0.346576998451015,0,0,0,0,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0.336283722218824,0.606965604236632,0,0.709618961301111,0,0,0,0.0657727735628491,0.236387681767936,0.444925607568277,0.078493092850514,0,0.560544326627578,0,0.431855182437243,0,0.428859265059938,1.58013611732727,0,0,0,0.207216164163037,0.3414369541879,0,1.29068207646083,0,0,0,0.9164274741762,0,0,0.447421727191169,5.98716425052982,4.14520944939716,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0.773494655682926,0,0.178553938605658,0.705789743431384,1.92579280054004,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.459474497674225,0,0,0,0,0,0.213233981900981,0,4.13369022950439,4.46937942930177,0,0,0,0.21771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| ||
|short_description=p@chr20:30307217..30307248,- | |short_description=p@chr20:30307217..30307248,- | ||
}} | }} |
Latest revision as of 12:50, 28 July 2015
Short description: | p@chr20:30307217..30307248, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30307217..30307248, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.35e-14 | 253 |
epithelial cell of tracheobronchial tree | 2.11e-10 | 9 |
epithelial cell of lower respiratory tract | 2.11e-10 | 9 |
placental epithelial cell | 2.20e-10 | 3 |
keratinocyte | 9.37e-10 | 5 |
extraembryonic cell | 3.88e-09 | 19 |
endodermal cell | 1.75e-08 | 58 |
endo-epithelial cell | 2.06e-08 | 42 |
stratified squamous epithelial cell | 4.01e-08 | 6 |
keratin accumulating cell | 4.01e-08 | 6 |
stratified epithelial cell | 4.01e-08 | 6 |
keratinizing barrier epithelial cell | 4.01e-08 | 6 |
epithelial fate stem cell | 4.01e-08 | 6 |
stratified epithelial stem cell | 4.01e-08 | 6 |
surface ectodermal cell | 4.01e-08 | 6 |
amniotic epithelial cell | 3.82e-07 | 2 |
respiratory epithelial cell | 5.38e-07 | 13 |
general ecto-epithelial cell | 6.01e-07 | 14 |
erythroid lineage cell | 7.53e-07 | 2 |
erythroblast | 7.53e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 7.53e-07 | 2 |
erythroid progenitor cell | 7.53e-07 | 2 |
reticulocyte | 7.53e-07 | 2 |
proerythroblast | 7.53e-07 | 2 |
basophilic erythroblast | 7.53e-07 | 2 |
polychromatophilic erythroblast | 7.53e-07 | 2 |
orthochromatic erythroblast | 7.53e-07 | 2 |
mammary gland epithelial cell | 9.56e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.97e-13 | 14 |
membranous layer | 5.97e-13 | 14 |
blood | 3.48e-12 | 15 |
haemolymphatic fluid | 3.48e-12 | 15 |
organism substance | 3.48e-12 | 15 |
placenta | 7.30e-08 | 4 |
allantois | 7.30e-08 | 4 |
chorion | 2.57e-07 | 7 |
amnion | 3.07e-07 | 7 |
extraembryonic structure | 6.32e-07 | 24 |
mammary gland | 9.56e-07 | 4 |
mammary bud | 9.56e-07 | 4 |
mammary ridge | 9.56e-07 | 4 |
mammary placode | 9.56e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.49e-09 | 25 |
signet ring cell adenocarcinoma | 2.58e-07 | 2 |
clear cell adenocarcinoma | 8.96e-07 | 2 |