FFCP PHASE1:Hg19::chr20:31372591..31372603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:31372591..31372603,+ | |||
|coexpression_cluster_id=C130 | |coexpression_cluster_id=C130 | ||
|description=CAGE_peak_at_chr20:31372591..31372603,+ | |description=CAGE_peak_at_chr20:31372591..31372603,+ | ||
|id=chr20:31372591..31372603,+ | |id=chr20:31372591..31372603,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.85e-19!5;CL:0000039!1.44e-13!7;CL:0000586!1.44e-13!7 | |ontology_enrichment_celltype=CL:0002322!1.85e-19!5;CL:0000039!1.44e-13!7;CL:0000586!1.44e-13!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.56e-89;5!CL:0002321;5.01e-30;15!CL:0000540;8.14e-28;6!CL:0000404;8.14e-28;6!CL:0000039;1.06e-23;7!CL:0000586;1.06e-23;7!CL:0000148;7.90e-17;10!CL:0000147;3.25e-12;14!CL:0000710;9.87e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.80e-89,5;CL:0000540,7.10e-28,6;CL:0000031,7.10e-28,6;CL:0000404,7.10e-28,6;CL:0000039,1.14e-23,7;CL:0000586,1.14e-23,7;CL:0000047,4.20e-21,8;CL:0000148,7.29e-17,10;CL:0000541,7.29e-17,10;CL:0000147,3.07e-12,14;CL:0000133,1.46e-10,59;CL:0000710,9.48e-09,20;CL:0000221,1.12e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;8.14e-28;6!UBERON:0009117;8.12e-17;10!UBERON:0005564;8.12e-17;10 | |||
|ontology_enrichment_disease=DOID:3095!5.57e-12!22;DOID:2994!5.57e-12!22;DOID:162!6.45e-09!235;DOID:14566!1.43e-08!239;DOID:305!2.21e-08!106;DOID:4468!5.48e-08!2;DOID:8692!1.33e-07!31;DOID:1036!4.20e-07!8 | |ontology_enrichment_disease=DOID:3095!5.57e-12!22;DOID:2994!5.57e-12!22;DOID:162!6.45e-09!235;DOID:14566!1.43e-08!239;DOID:305!2.21e-08!106;DOID:4468!5.48e-08!2;DOID:8692!1.33e-07!31;DOID:1036!4.20e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.52e-08;22!DOID:2994;5.52e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.66e-08,22;DOID:2994,5.66e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.13e-08!8 | |ontology_enrichment_uberon=UBERON:0000473!7.13e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.75e-21;8!UBERON:0003135;2.37e-15;11!UBERON:0000922;2.89e-13;49!UBERON:0000991;2.45e-08;21!UBERON:0003101;5.52e-08;22!UBERON:0000079;5.52e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.30e-21,8;UBERON:0003135,2.49e-15,11;UBERON:0000991,2.51e-08,21;UBERON:0009196,2.51e-08,21;UBERON:0009117,2.51e-08,21;UBERON:0005564,2.51e-08,21;UBERON:0004176,5.66e-08,22;UBERON:0003101,5.66e-08,22;UBERON:0000079,5.66e-08,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,2.12047629314376,2.67246068599892,1.45125477021519,2.77552935963191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0.210998064528027,0.163232808159148,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,1.92903778158023,3.98864366131978,10.3860084507296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.655593431782173,0.126698501011437,1.22386595690378,1.60330443159336,0.827054095813604,6.76910356089413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:31372591..31372603,+ | |short_description=p@chr20:31372591..31372603,+ | ||
}} | }} |
Latest revision as of 13:01, 28 July 2015
Short description: | p@chr20:31372591..31372603, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:31372591..31372603, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.80e-89 | 5 |
neuron | 7.10e-28 | 6 |
neuroblast | 7.10e-28 | 6 |
electrically signaling cell | 7.10e-28 | 6 |
germ line cell | 1.14e-23 | 7 |
germ cell | 1.14e-23 | 7 |
neuronal stem cell | 4.20e-21 | 8 |
melanocyte | 7.29e-17 | 10 |
melanoblast | 7.29e-17 | 10 |
pigment cell | 3.07e-12 | 14 |
neurectodermal cell | 1.46e-10 | 59 |
neurecto-epithelial cell | 9.48e-09 | 20 |
ectodermal cell | 1.12e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 8.30e-21 | 8 |
male reproductive organ | 2.49e-15 | 11 |
gonad | 2.51e-08 | 21 |
indifferent external genitalia | 2.51e-08 | 21 |
indifferent gonad | 2.51e-08 | 21 |
gonad primordium | 2.51e-08 | 21 |
external genitalia | 5.66e-08 | 22 |
male organism | 5.66e-08 | 22 |
male reproductive system | 5.66e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.66e-08 | 22 |
germ cell cancer | 5.66e-08 | 22 |