FFCP PHASE1:Hg19::chr20:34679819..34679830,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:34679819..34679830,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_at_chr20:34679819..34679830,+ | |description=CAGE_peak_at_chr20:34679819..34679830,+ | ||
|id=chr20:34679819..34679830,+ | |id=chr20:34679819..34679830,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.30e-23!5;CL:0000457!1.30e-23!5;CL:0002191!1.30e-23!5;CL:0000097!1.30e-23!5;CL:0000831!1.30e-23!5;CL:0002028!1.30e-23!5;CL:0000163!5.60e-13!9;CL:0000083!2.56e-10!4;CL:1000415!1.42e-09!2 | |ontology_enrichment_celltype=CL:0002274!1.30e-23!5;CL:0000457!1.30e-23!5;CL:0002191!1.30e-23!5;CL:0000097!1.30e-23!5;CL:0000831!1.30e-23!5;CL:0002028!1.30e-23!5;CL:0000163!5.60e-13!9;CL:0000083!2.56e-10!4;CL:1000415!1.42e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.94e-123;5!CL:0000163;8.63e-69;9!CL:0000151;4.39e-16;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.94e-123,5;CL:0002028,2.94e-123,5;CL:0000163,8.63e-69,9;CL:0000151,1.53e-17,36;CL:0000839,1.51e-09,66;CL:0000557,2.07e-09,67;CL:0000766,8.88e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1793!2.56e-10!4;DOID:170!5.11e-07!6 | |ontology_enrichment_disease=DOID:1793!2.56e-10!4;DOID:170!5.11e-07!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002075!5.98e-14!18;UBERON:0002110!8.31e-14!3;UBERON:0006242!8.31e-14!3;UBERON:0001255!4.71e-09!2;UBERON:0001556!4.71e-09!2;UBERON:0001046!2.08e-07!19;UBERON:0000162!3.12e-07!14;UBERON:0001353!3.12e-07!14;UBERON:0000163!3.12e-07!14;UBERON:0006866!3.12e-07!14;UBERON:0000164!3.12e-07!14;UBERON:0000931!3.12e-07!14;UBERON:0004122!9.88e-07!15;UBERON:0000002!9.89e-07!6;UBERON:0001560!9.89e-07!6 | |ontology_enrichment_uberon=UBERON:0002075!5.98e-14!18;UBERON:0002110!8.31e-14!3;UBERON:0006242!8.31e-14!3;UBERON:0001255!4.71e-09!2;UBERON:0001556!4.71e-09!2;UBERON:0001046!2.08e-07!19;UBERON:0000162!3.12e-07!14;UBERON:0001353!3.12e-07!14;UBERON:0000163!3.12e-07!14;UBERON:0006866!3.12e-07!14;UBERON:0000164!3.12e-07!14;UBERON:0000931!3.12e-07!14;UBERON:0004122!9.88e-07!15;UBERON:0000002!9.89e-07!6;UBERON:0001560!9.89e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;1.11e-25;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,1.26e-25,1;UBERON:0002371,2.48e-08,76;UBERON:0001474,9.69e-08,82;UBERON:0004765,4.51e-07,90;UBERON:0002405,7.52e-07,93 | |||
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| ||
|short_description=p@chr20:34679819..34679830,+ | |short_description=p@chr20:34679819..34679830,+ | ||
}} | }} |
Latest revision as of 13:30, 28 July 2015
Short description: | p@chr20:34679819..34679830, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:34679819..34679830, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.94e-123 | 5 |
basophil mast progenitor cell | 2.94e-123 | 5 |
endocrine cell | 8.63e-69 | 9 |
secretory cell | 1.53e-17 | 36 |
myeloid lineage restricted progenitor cell | 1.51e-09 | 66 |
granulocyte monocyte progenitor cell | 2.07e-09 | 67 |
myeloid leukocyte | 8.88e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
vagina | 1.26e-25 | 1 |
bone marrow | 2.48e-08 | 76 |
bone element | 9.69e-08 | 82 |
skeletal element | 4.51e-07 | 90 |
immune system | 7.52e-07 | 93 |