FFCP PHASE1:Hg19::chr20:44048281..44048327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44048281..44048327,- | |||
|coexpression_cluster_id=C126 | |coexpression_cluster_id=C126 | ||
|description=CAGE_peak_at_chr20:44048281..44048327,- | |description=CAGE_peak_at_chr20:44048281..44048327,- | ||
|id=chr20:44048281..44048327,- | |id=chr20:44048281..44048327,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;4.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.43e-08!14;DOID:193!1.63e-07!29;DOID:120!2.35e-07!27 | |ontology_enrichment_disease=DOID:2394!2.43e-08!14;DOID:193!1.63e-07!29;DOID:120!2.35e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.03e-07;1!DOID:1357;2.03e-07;1!DOID:3119;3.19e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.09e-07,1;DOID:1357,2.09e-07,1;DOID:3119,3.61e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000992!9.83e-10!13 | |ontology_enrichment_uberon=UBERON:0000992!9.83e-10!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.54e-12;2!UBERON:0001764;2.03e-07;1!UBERON:0001825;2.03e-07;1!UBERON:0002038;4.20e-07;1!UBERON:0004913;4.20e-07;1!UBERON:0003703;4.20e-07;1!UBERON:0009661;4.20e-07;1!UBERON:0002950;4.20e-07;1!UBERON:0001891;4.20e-07;1!UBERON:0001174;4.20e-07;1!UBERON:0004914;4.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.07e-12,2;UBERON:0001764,2.09e-07,1;UBERON:0001825,2.09e-07,1;UBERON:0002038,3.62e-07,1;UBERON:0009661,3.62e-07,1;UBERON:0002950,3.62e-07,1;UBERON:0001891,3.62e-07,1;UBERON:0009616,3.62e-07,1;UBERON:0010286,3.62e-07,1;UBERON:0004913,6.57e-07,1;UBERON:0003703,6.57e-07,1;UBERON:0001174,6.57e-07,1;UBERON:0004914,6.57e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.866364470720326,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0.284338464974843,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.70763890732835,1.76171156811282,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00803371612366,0.534880391567015,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0,0,0.900273288253207,0,0.772921620136887,0,0.506328996723799,0,1.00973509697646,0,0,2.4850671476163,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,3.52457796419313,0.432359860250884,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0.36807447515742,0.500170521059677,0,0.831883446123229,0.713715955188647,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0,0.779160935160341,0,0,0.19924798825107,0,2.01546198283421,0.20453736500431,0.123084805461069,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0.185536196323703,0,4.42727193844896,0.262379999988587,0,0,0.254253650292766,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.471807930864739,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0.173559738335131,0.391969589657511,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.320635281006135,0.213452994739353,0.39961921916426,0.288180834308212,0,20.7629947412977,0,0.124252535565433,0,0,0,0,0.577901179803038,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,1.28767814440971,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0.511164065356265,0.113312091520126,0.146552233678082,0,0.258565912723101,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0.612691153526923,0,2.04170325125305,0,0.244052529803926,0.3755727921195,0,0.332787154610557,0.124192805882767,0,0.249960815924213,0,0,0.470531639396343,0,3.62302571527063,0.298509605773748,0.701139929541673,4.43844689202091,1.51522404220071,1.76097531226803,0.889811221596536,0.915360273587694,1.36107831386915,0.621748802331122,0.295710299979268,0.318593534327405,0,0.621051827505038,0.829412415681711,1.06336685823198,0,0.751288044986092,0,0.406870733204662,1.63663793282303,0.429642228169954,2.78420255927096,0.796191777397232,1.20008329398946,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0.172214979660816,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.705351887381368,0,0.0642292250964595,0,0.798169295285756,0.205116364240755,0,0.0691572524642179,0,0,0.392590874004102,0,0,0.346576998451015,0,0.690359926060101,0,0.225630985047772,0,0,0,0,1.03499260351932,0.135075169236789,0,0,0.126831620387814,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0.0887023701626388,0.806637912890455,0.857440047187092,0,0.197318320688547,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0.170426809518315,0,0,0,0.955538938977433,0.447421727191169,0.392600934460972,0.243835849964539,0,0,0,0,9.59151800194633,5.37167092935694,0,0,0,3.17021971490014,0.154348316215889,0.218559560503957,8.93602863086893,0,0,0,0,0,0,0,0,0.199882311849858,0.357107877211315,0.705789743431384,0.320965466756673,0,0,1.43339583151451,0,0.203974470572744,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.227336094654718,0,0,0.517164979309476,0.426467963801962,0.23806443146374,0,0,1.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| ||
|short_description=p@chr20:44048281..44048327,- | |short_description=p@chr20:44048281..44048327,- | ||
}} | }} |
Latest revision as of 14:28, 28 July 2015
Short description: | p@chr20:44048281..44048327, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44048281..44048327, - |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.07e-12 | 2 |
maxillary sinus | 2.09e-07 | 1 |
paranasal sinus | 2.09e-07 | 1 |
substantia nigra | 3.62e-07 | 1 |
midbrain nucleus | 3.62e-07 | 1 |
regional part of midbrain | 3.62e-07 | 1 |
midbrain | 3.62e-07 | 1 |
presumptive midbrain | 3.62e-07 | 1 |
midbrain neural tube | 3.62e-07 | 1 |
hepatopancreatic ampulla | 6.57e-07 | 1 |
extrahepatic bile duct | 6.57e-07 | 1 |
common bile duct | 6.57e-07 | 1 |
duodenal papilla | 6.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.09e-07 | 1 |
maxillary sinus cancer | 2.09e-07 | 1 |
gastrointestinal system cancer | 3.61e-07 | 14 |