FFCP PHASE1:Hg19::chr20:55204118..55204122,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:55204118..55204122,-
|short_description=p@chr20:55204118..55204122,-
|description=CAGE_peak_at_chr20:55204118..55204122,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:55204118..55204122,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr20:55204118..55204122,- | |||
|id=chr20:55204118..55204122,- | |||
|ontology_enrichment_celltype=CL:0000039!6.71e-09!7;CL:0000586!6.71e-09!7;CL:1001319!2.98e-07!1;CL:1000600!2.98e-07!1;CL:0000083!2.99e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0001014;9.86e-18;2!CL:0001016;9.86e-18;2!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0000453;6.78e-08;5!CL:0002559;6.78e-08;5!CL:0000840;8.72e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,9.07e-18,2;CL:0001016,9.07e-18,2;CL:0000346,2.89e-12,3;CL:1000428,2.89e-12,3;CL:0000453,6.55e-08,5;CL:0002559,7.01e-08,5;CL:0000840,8.48e-07,5;CL:0001029,8.48e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!2.04e-15!4;DOID:1612!2.04e-15!4;DOID:0050687!3.11e-09!143;DOID:1799!8.28e-08!1;DOID:10165!8.28e-08!1;DOID:1798!8.28e-08!1;DOID:3151!1.07e-07!1;DOID:3149!1.07e-07!1;DOID:305!1.74e-07!106;DOID:0050619!1.91e-07!1;DOID:1357!1.91e-07!1;DOID:1793!2.99e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.28e-34;4!DOID:1612;4.28e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.28e-34,4;DOID:1612,4.28e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.91e-07!1;UBERON:0001825!1.91e-07!1;UBERON:0004913!2.04e-07!1;UBERON:0003703!2.04e-07!1;UBERON:0001174!2.04e-07!1;UBERON:0004914!2.04e-07!1;UBERON:0004645!2.98e-07!1;UBERON:0001256!2.98e-07!1;UBERON:0001259!2.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.49e-14;10!UBERON:0001443;4.00e-13;11!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0001052;1.50e-09;4!UBERON:0002073;6.78e-08;5!UBERON:0004907;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.49e-14,10;UBERON:0001443,4.00e-13,11;UBERON:0000412,2.89e-12,3;UBERON:0001992,2.89e-12,3;UBERON:0001052,1.70e-09,4;UBERON:0002073,7.01e-08,5;UBERON:0005086,7.01e-08,5;UBERON:0004907,7.49e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,1.88491053260521,0.434589487688032,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,1.88491053260521,0.434589487688032,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:55204118..55204122,- | |||
}} | }} |
Latest revision as of 15:38, 28 July 2015
Short description: | p@chr20:55204118..55204122, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:55204118..55204122, - |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 9.07e-18 | 2 |
immature CD1a-positive Langerhans cell | 9.07e-18 | 2 |
hair follicle dermal papilla cell | 2.89e-12 | 3 |
stem cell of epidermis | 2.89e-12 | 3 |
Langerhans cell | 6.55e-08 | 5 |
hair follicle cell | 7.01e-08 | 5 |
immature conventional dendritic cell | 8.48e-07 | 5 |
common dendritic progenitor | 8.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
breast | 2.49e-14 | 10 |
chest | 4.00e-13 | 11 |
dermal papilla | 2.89e-12 | 3 |
papillary layer of dermis | 2.89e-12 | 3 |
rectum | 1.70e-09 | 4 |
hair follicle | 7.01e-08 | 5 |
hair follicle placode | 7.01e-08 | 5 |
lower digestive tract | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.28e-34 | 4 |
breast cancer | 4.28e-34 | 4 |