FFCP PHASE1:Hg19::chr21:23434949..23434972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:23434949..23434972,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr21:23434949..23434972,- | |description=CAGE_peak_at_chr21:23434949..23434972,- | ||
|id=chr21:23434949..23434972,- | |id=chr21:23434949..23434972,- | ||
|ontology_enrichment_celltype=CL:0000181!1.65e-10!12;CL:0000417!1.65e-10!12;CL:0000668!1.65e-10!12;CL:0000414!1.65e-10!12;CL:0000412!1.65e-10!12;CL:0000182!1.65e-10!12;CL:0002563!3.10e-08!4;CL:0000223!4.38e-07!59 | |ontology_enrichment_celltype=CL:0000181!1.65e-10!12;CL:0000417!1.65e-10!12;CL:0000668!1.65e-10!12;CL:0000414!1.65e-10!12;CL:0000412!1.65e-10!12;CL:0000182!1.65e-10!12;CL:0002563!3.10e-08!4;CL:0000223!4.38e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.72e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-22,12;CL:0000223,3.57e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.49e-18;1!UBERON:0004161;6.35e-07;11 | |||
|ontology_enrichment_disease=DOID:114!1.54e-15!2;DOID:178!1.65e-08!1;DOID:326!1.65e-08!1;DOID:3978!1.65e-08!1;DOID:3394!1.65e-08!1;DOID:5844!1.65e-08!1;DOID:1287!3.22e-08!4 | |ontology_enrichment_disease=DOID:114!1.54e-15!2;DOID:178!1.65e-08!1;DOID:326!1.65e-08!1;DOID:3978!1.65e-08!1;DOID:3394!1.65e-08!1;DOID:5844!1.65e-08!1;DOID:1287!3.22e-08!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.94e-15!23;UBERON:0001155!1.45e-13!9;UBERON:0009856!1.45e-13!26;UBERON:0008835!5.32e-12!22;UBERON:0003894!5.32e-12!22;UBERON:0000059!3.95e-11!11;UBERON:0007499!1.69e-10!25;UBERON:0009497!1.69e-10!25;UBERON:0000015!1.69e-10!25;UBERON:0002423!1.69e-10!25;UBERON:0006235!1.69e-10!25;UBERON:0004161!1.69e-10!25;UBERON:0002107!5.14e-10!19;UBERON:0006925!5.14e-10!19;UBERON:0008836!5.14e-10!19;UBERON:0003929!6.61e-10!54;UBERON:0001154!5.70e-09!1;UBERON:0001153!5.70e-09!1;UBERON:0001301!9.02e-09!1;UBERON:0007023!1.85e-08!115;UBERON:0001242!3.10e-08!4;UBERON:0001262!3.10e-08!4;UBERON:0004786!3.10e-08!4;UBERON:0004808!3.10e-08!4;UBERON:0001277!3.10e-08!4;UBERON:0002368!2.29e-07!35;UBERON:0005057!2.96e-07!26;UBERON:0004907!8.41e-07!5;UBERON:0003350!9.45e-07!5 | |ontology_enrichment_uberon=UBERON:0009854!1.94e-15!23;UBERON:0001155!1.45e-13!9;UBERON:0009856!1.45e-13!26;UBERON:0008835!5.32e-12!22;UBERON:0003894!5.32e-12!22;UBERON:0000059!3.95e-11!11;UBERON:0007499!1.69e-10!25;UBERON:0009497!1.69e-10!25;UBERON:0000015!1.69e-10!25;UBERON:0002423!1.69e-10!25;UBERON:0006235!1.69e-10!25;UBERON:0004161!1.69e-10!25;UBERON:0002107!5.14e-10!19;UBERON:0006925!5.14e-10!19;UBERON:0008836!5.14e-10!19;UBERON:0003929!6.61e-10!54;UBERON:0001154!5.70e-09!1;UBERON:0001153!5.70e-09!1;UBERON:0001301!9.02e-09!1;UBERON:0007023!1.85e-08!115;UBERON:0001242!3.10e-08!4;UBERON:0001262!3.10e-08!4;UBERON:0004786!3.10e-08!4;UBERON:0004808!3.10e-08!4;UBERON:0001277!3.10e-08!4;UBERON:0002368!2.29e-07!35;UBERON:0005057!2.96e-07!26;UBERON:0004907!8.41e-07!5;UBERON:0003350!9.45e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.35e-22;19!UBERON:0006925;6.35e-22;19!UBERON:0001154;9.49e-18;1!UBERON:0001153;9.49e-18;1!UBERON:0009854;9.49e-18;1!UBERON:0001155;4.41e-17;9!UBERON:0002423;1.07e-16;25!UBERON:0000059;4.22e-14;11!UBERON:0002365;6.24e-14;31!UBERON:0002330;6.24e-14;31!UBERON:0002368;3.29e-11;33!UBERON:0005172;1.82e-09;52!UBERON:0005173;1.82e-09;52!UBERON:0000160;7.45e-09;17!UBERON:0001007;1.73e-08;81!UBERON:0000949;2.90e-07;43!UBERON:0005409;4.78e-07;22!UBERON:0002530;5.84e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,9.57e-26,23;UBERON:0009856,9.05e-23,26;UBERON:0002107,6.21e-22,19;UBERON:0006925,6.21e-22,19;UBERON:0008836,6.21e-22,19;UBERON:0008835,5.79e-19,22;UBERON:0003894,5.79e-19,22;UBERON:0001154,1.03e-17,1;UBERON:0001153,1.03e-17,1;UBERON:0001045,1.03e-17,1;UBERON:0001155,4.41e-17,9;UBERON:0007499,1.05e-16,25;UBERON:0009497,1.05e-16,25;UBERON:0000015,1.05e-16,25;UBERON:0002423,1.05e-16,25;UBERON:0006235,1.05e-16,25;UBERON:0004161,1.05e-16,25;UBERON:0000059,4.22e-14,11;UBERON:0002365,1.72e-13,31;UBERON:0002330,1.72e-13,31;UBERON:0002368,5.90e-12,35;UBERON:0005172,7.08e-11,54;UBERON:0005173,7.08e-11,54;UBERON:0003929,7.21e-11,54;UBERON:0004921,1.49e-10,118;UBERON:0002530,6.26e-10,59;UBERON:0002417,9.09e-10,60;UBERON:0000916,9.09e-10,60;UBERON:0000949,2.64e-09,45;UBERON:0000160,7.45e-09,17;UBERON:0001007,1.86e-08,145;UBERON:0001555,1.86e-08,145;UBERON:0007026,1.86e-08,145;UBERON:0004119,1.36e-07,160;UBERON:0000925,1.36e-07,160;UBERON:0006595,1.36e-07,160;UBERON:0005911,4.48e-07,82 | |||
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|short_description=p@chr21:23434949..23434972,- | |short_description=p@chr21:23434949..23434972,- | ||
}} | }} |
Latest revision as of 16:55, 28 July 2015
Short description: | p@chr21:23434949..23434972, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:23434949..23434972, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.72e-22 | 12 |
endodermal cell | 3.57e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 9.57e-26 | 23 |
sac | 9.05e-23 | 26 |
liver | 6.21e-22 | 19 |
digestive gland | 6.21e-22 | 19 |
liver bud | 6.21e-22 | 19 |
hepatic diverticulum | 5.79e-19 | 22 |
liver primordium | 5.79e-19 | 22 |
vermiform appendix | 1.03e-17 | 1 |
caecum | 1.03e-17 | 1 |
midgut | 1.03e-17 | 1 |
colon | 4.41e-17 | 9 |
epithelial sac | 1.05e-16 | 25 |
epithelium of foregut-midgut junction | 1.05e-16 | 25 |
anatomical boundary | 1.05e-16 | 25 |
hepatobiliary system | 1.05e-16 | 25 |
foregut-midgut junction | 1.05e-16 | 25 |
septum transversum | 1.05e-16 | 25 |
large intestine | 4.22e-14 | 11 |
exocrine gland | 1.72e-13 | 31 |
exocrine system | 1.72e-13 | 31 |
endocrine gland | 5.90e-12 | 35 |
abdomen element | 7.08e-11 | 54 |
abdominal segment element | 7.08e-11 | 54 |
gut epithelium | 7.21e-11 | 54 |
subdivision of digestive tract | 1.49e-10 | 118 |
gland | 6.26e-10 | 59 |
abdominal segment of trunk | 9.09e-10 | 60 |
abdomen | 9.09e-10 | 60 |
endocrine system | 2.64e-09 | 45 |
intestine | 7.45e-09 | 17 |
digestive system | 1.86e-08 | 145 |
digestive tract | 1.86e-08 | 145 |
primitive gut | 1.86e-08 | 145 |
endoderm-derived structure | 1.36e-07 | 160 |
endoderm | 1.36e-07 | 160 |
presumptive endoderm | 1.36e-07 | 160 |
endo-epithelium | 4.48e-07 | 82 |