FFCP PHASE1:Hg19::chr21:37873665..37873669,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:37873665..37873669,+ | |||
|description=CAGE_peak_at_chr21:37873665..37873669,+ | |description=CAGE_peak_at_chr21:37873665..37873669,+ | ||
|id=chr21:37873665..37873669,+ | |id=chr21:37873665..37873669,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.24e-20;6!CL:0002139;3.69e-09;24!CL:0000115;2.84e-08;36!CL:0002262;6.14e-08;2!CL:1000398;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.42e-20,6;CL:0002138,1.42e-20,6;CL:0005022,1.42e-20,6;CL:0000115,3.13e-09,36;CL:0002139,4.03e-09,24;CL:0002262,4.09e-08,2;CL:1000398,4.09e-08,2;CL:0002078,2.28e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;1.24e-20;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;1.40e-14;1!DOID:3350;6.14e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.61e-14,1;DOID:3350,6.58e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.21e-15;8!UBERON:0004536;1.21e-15;8!UBERON:0006558;1.21e-15;8!UBERON:0007195;1.40e-14;1!UBERON:0002465;1.22e-12;10!UBERON:0002405;3.64e-08;27!UBERON:0001281;6.14e-08;2!UBERON:0003497;6.14e-08;2!UBERON:0003909;6.14e-08;2!UBERON:0003835;6.14e-08;2!UBERON:0002107;7.64e-07;19!UBERON:0006925;7.64e-07;19!UBERON:0002368;8.37e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.34e-15,8;UBERON:0004536,1.34e-15,8;UBERON:0006558,1.34e-15,8;UBERON:0007195,1.41e-14,1;UBERON:0002465,1.33e-12,10;UBERON:0001281,4.09e-08,2;UBERON:0003497,4.09e-08,2;UBERON:0003909,4.09e-08,2;UBERON:0003835,4.09e-08,2;UBERON:0000949,1.90e-07,45;UBERON:0002107,6.24e-07,19;UBERON:0006925,6.24e-07,19;UBERON:0008836,6.24e-07,19 | |||
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| ||
|short_description=p@chr21:37873665..37873669,+ | |short_description=p@chr21:37873665..37873669,+ | ||
}} | }} |
Latest revision as of 17:41, 28 July 2015
Short description: | p@chr21:37873665..37873669, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:37873665..37873669, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.42e-20 | 6 |
endothelial cell of lymphatic vessel | 1.42e-20 | 6 |
vascular lymphangioblast | 1.42e-20 | 6 |
endothelial cell | 3.13e-09 | 36 |
endothelial cell of vascular tree | 4.03e-09 | 24 |
endothelial cell of sinusoid | 4.09e-08 | 2 |
endothelial cell of hepatic sinusoid | 4.09e-08 | 2 |
meso-epithelial cell | 2.28e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.34e-15 | 8 |
lymph vasculature | 1.34e-15 | 8 |
lymphatic part of lymphoid system | 1.34e-15 | 8 |
stroma of bone marrow | 1.41e-14 | 1 |
lymphoid system | 1.33e-12 | 10 |
hepatic sinusoid | 4.09e-08 | 2 |
abdomen blood vessel | 4.09e-08 | 2 |
sinusoid | 4.09e-08 | 2 |
abdominal segment blood vessel | 4.09e-08 | 2 |
endocrine system | 1.90e-07 | 45 |
liver | 6.24e-07 | 19 |
digestive gland | 6.24e-07 | 19 |
liver bud | 6.24e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.61e-14 | 1 |
mesenchymal cell neoplasm | 6.58e-08 | 2 |