FFCP PHASE1:Hg19::chr21:45020688..45020711,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:45020688..45020711,- | |||
|coexpression_cluster_id=C515 | |coexpression_cluster_id=C515 | ||
|description=CAGE_peak_at_chr21:45020688..45020711,- | |description=CAGE_peak_at_chr21:45020688..45020711,- | ||
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|ontology_enrichment_celltype=CL:0000066!1.35e-27!254;CL:0002076!1.19e-18!43;CL:0000220!2.33e-16!246;CL:0002321!6.10e-16!248;CL:0000548!1.59e-15!679;CL:0000004!1.59e-15!679;CL:0000255!1.59e-15!679;CL:0000012!4.02e-15!682;CL:0000223!1.69e-12!59;CL:0002368!6.52e-11!13;CL:0000003!1.70e-10!722;CL:0000063!4.08e-09!578;CL:0000144!1.39e-08!625;CL:0000076!2.47e-08!62;CL:0000077!3.37e-08!19;CL:0002159!3.22e-07!13;CL:0002202!3.42e-07!9;CL:0002632!3.42e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.35e-27!254;CL:0002076!1.19e-18!43;CL:0000220!2.33e-16!246;CL:0002321!6.10e-16!248;CL:0000548!1.59e-15!679;CL:0000004!1.59e-15!679;CL:0000255!1.59e-15!679;CL:0000012!4.02e-15!682;CL:0000223!1.69e-12!59;CL:0002368!6.52e-11!13;CL:0000003!1.70e-10!722;CL:0000063!4.08e-09!578;CL:0000144!1.39e-08!625;CL:0000076!2.47e-08!62;CL:0000077!3.37e-08!19;CL:0002159!3.22e-07!13;CL:0002202!3.42e-07!9;CL:0002632!3.42e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.50e-17;13!CL:0002076;7.43e-15;42!CL:0000349;1.20e-12;19!CL:0002159;4.95e-12;14!CL:0002202;3.27e-10;9!CL:0002632;3.27e-10;9!CL:0000077;2.23e-09;19!CL:0000244;5.80e-09;4!CL:0000731;5.80e-09;4!CL:0000307;6.37e-07;3!CL:0002328;8.51e-07;3!CL:0002166;9.77e-07;3 | |ontology_enrichment_celltype_v019=CL:0002368;7.50e-17;13!CL:0002076;7.43e-15;42!CL:0000349;1.20e-12;19!CL:0002159;4.95e-12;14!CL:0002202;3.27e-10;9!CL:0002632;3.27e-10;9!CL:0000077;2.23e-09;19!CL:0000244;5.80e-09;4!CL:0000731;5.80e-09;4!CL:0000307;6.37e-07;3!CL:0002328;8.51e-07;3!CL:0002166;9.77e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.91e-28,253;CL:0002076,2.69e-19,42;CL:0002368,7.68e-17,13;CL:0000223,5.00e-13,58;CL:0000349,8.70e-13,19;CL:0002159,5.04e-12,14;CL:0002202,3.30e-10,9;CL:0002632,3.30e-10,9;CL:0000076,1.08e-09,63;CL:0000077,2.61e-09,19;CL:0000244,5.85e-09,4;CL:0000731,5.85e-09,4;CL:0002321,6.06e-09,250;CL:0000068,6.41e-07,3;CL:0000069,6.41e-07,3;CL:0000307,6.41e-07,3;CL:0000377,6.41e-07,3;CL:0002328,8.64e-07,3;CL:0002166,9.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;5.75e-08;58!CL:0000377;6.37e-07;3 | |ontology_enrichment_development_v019=CL:0000223;5.75e-08;58!CL:0000377;6.37e-07;3 | ||
|ontology_enrichment_disease=DOID:120!1.42e-07!27 | |ontology_enrichment_disease=DOID:120!1.42e-07!27 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.72e-10!169;UBERON:0000925!4.72e-10!169;UBERON:0006595!4.72e-10!169;UBERON:0005631!1.16e-09!14;UBERON:0000158!1.16e-09!14;UBERON:0000478!1.16e-08!24;UBERON:0001004!1.94e-08!72;UBERON:0000065!6.33e-08!53;UBERON:0003104!3.20e-07!238;UBERON:0009142!3.20e-07!238;UBERON:0001737!4.46e-07!9;UBERON:0001048!7.50e-07!168 | |ontology_enrichment_uberon=UBERON:0004119!4.72e-10!169;UBERON:0000925!4.72e-10!169;UBERON:0006595!4.72e-10!169;UBERON:0005631!1.16e-09!14;UBERON:0000158!1.16e-09!14;UBERON:0000478!1.16e-08!24;UBERON:0001004!1.94e-08!72;UBERON:0000065!6.33e-08!53;UBERON:0003104!3.20e-07!238;UBERON:0009142!3.20e-07!238;UBERON:0001737!4.46e-07!9;UBERON:0001048!7.50e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.76e-11;24!UBERON:0000065;7.30e-09;44!UBERON:0005631;4.07e-08;10!UBERON:0000158;4.07e-08;10!UBERON:0000486;1.93e-07;12!UBERON:0001737;2.84e-07;9!UBERON:0001557;2.84e-07;9!UBERON:0000365;4.21e-07;5!UBERON:0010371;5.58e-07;31!UBERON:0000072;6.53e-07;37!UBERON:0004815;8.51e-07;3!UBERON:0002031;8.51e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000478;6.76e-11;24!UBERON:0000065;7.30e-09;44!UBERON:0005631;4.07e-08;10!UBERON:0000158;4.07e-08;10!UBERON:0000486;1.93e-07;12!UBERON:0001737;2.84e-07;9!UBERON:0001557;2.84e-07;9!UBERON:0000365;4.21e-07;5!UBERON:0010371;5.58e-07;31!UBERON:0000072;6.53e-07;37!UBERON:0004815;8.51e-07;3!UBERON:0002031;8.51e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.50e-11,14;UBERON:0000158,2.50e-11,14;UBERON:0000478,5.15e-11,24;UBERON:0001004,9.56e-09,74;UBERON:0000065,1.17e-08,54;UBERON:0004119,2.98e-08,160;UBERON:0000925,2.98e-08,160;UBERON:0006595,2.98e-08,160;UBERON:0008947,1.36e-07,38;UBERON:0003258,1.36e-07,38;UBERON:0001737,1.88e-07,9;UBERON:0000365,4.24e-07,5;UBERON:0004815,8.64e-07,3;UBERON:0002031,8.64e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,6.38908234903923,11.8626198555313,3.9319446983431,7.91300934685361,0,0,0,0.602694528023977,0.730310090387373,0,0.492484232307152,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,17.4690032650996,28.915768202712,31.0593368540102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0.486634870302636,0.378139268656271,0.221729397462564,0.175669571386252,0,11.6574492253614,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.6620635792512,0,0.633152558322899,0.662045904066094,0,0,1.12135520028461,1.06748995729705,1.97334038733728,0,0.404132016209064,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,1.02088964844019,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0,0.292311015483596,0.252433774244115,0.184099797284599,0,0,0.201504196455281,0.169560592310488,13.5282597214308,19.9104668031309,11.7589884109492,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.34867752062481,1.68707720918437,2.20587945464788,1.30727666455444,1.66089433377768,0.674156540800822,1.56977172100277,1.53898862778556,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0.686271241194102,21.8403067963165,6.74410519545717,5.2275065654048,18.5176890317059,0.325808305310325,0,0,0.231860809950154,1.17408694235822,0,0,0,0,0,0,0,0,14.0600750980165,31.9166043577833,20.8409392946308,3.49278238541108,4.65014301622339,3.06706143332169,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0.43596006883328,0.4400297149257,1.42198887333556,0,0,0.26593811658487,0,0.514414748524284,0,0,0.57191197463259,0,1.64648067356154,0,0.710783897485092,1.58390374586686,0.904318131178758,1.74306691720059,0.399891964728228,0,0,0,0.479249710983165,0,1.42636905040718,2.17171960001369,0.205476322550383,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.630809660135739,0.937131319941706,0,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0,0,0,0,0,5.15316871458641,18.3078983461547,7.55975733324201,0.496215615637554,0.61384789315225,0,0.512556597022804,1.02341449813341,0,0,0,0,0,0,0,0.120859449591622,24.4617893770008,6.16942625870505,0.574072240823034,0,0.131124414959424,1.80479845162965,0.924184045252977,0,1.46139224653261,0.844413031143006,0,0,0.647747748306418,0,0,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,11.15249795379,4.88067591996455,0,0.27470839445503,0.165018999841176,60.2978814895981,26.6524700874974,0,0,0,0,0.275673144969061,0.214840489736547,0,0.170453254832202,0.0890320356467374,53.056457830874,22.4862378817174,133.482897269335,12.138933702666,1.39453664789186,0.62962469366128,0,0,0,0,0.18532421910392,0.858749320451947,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0.842516912477962,0,0,0,0.272999822815972,0.848432591722276,0,0.551365343546124,0,0,0,0,1.01455188481352,0.30982349809975,0.845086807596724,0.286822704408103,0.392996164052485,2.1400263088875,0,0,0,0,0,41.5679526974212,38.2072297055399,25.0449265181042,0.0941438007767792,90.4061282609583,92.6593116171941,88.6860307073351,141.050167727073,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1623345421307,3.56357616999166,12.5935887860685,0,0,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,1.52776196950456,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0.628303510868405,0.325942115766024,10.5270382711533,0.366390373607449,4.26427820814908,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,1.20990716048664,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0.284609546029793,1.24807205711825,0.347119476670262,0.881931576729399,1.74118413160805,0,3.78369271437556,0,0.0730893170861856,0,0,0,0,1.37041924646751,0,0,0.391102765469606,0.64127056201227,0,0.19980960958213,0,0,0,0.432164393964449,0,4.24249262310232,1.35904206073614,1.46443984837266,0,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,2.1110671705139,0,0,0,0,0,0,2.39460383124975,0,0.170388021785422,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0.310874401165561,0,0.955780602982214,0.449803112163605,1.08684069813382,0,6.11435943483388,3.1304703708704,0.300515217994437,2.28483127301277,9.35802686370722,0,1.18151612746737,1.85613503951397,1.59238355479446,0.400027764663154,0,0.336749488765919,0,3.46715694733146,1.07220795687463,0.260994291965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| ||
|short_description=p@chr21:45020688..45020711,- | |short_description=p@chr21:45020688..45020711,- | ||
}} | }} |
Latest revision as of 18:19, 28 July 2015
Short description: | p@chr21:45020688..45020711, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:45020688..45020711, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.91e-28 | 253 |
endo-epithelial cell | 2.69e-19 | 42 |
respiratory epithelial cell | 7.68e-17 | 13 |
endodermal cell | 5.00e-13 | 58 |
extraembryonic cell | 8.70e-13 | 19 |
general ecto-epithelial cell | 5.04e-12 | 14 |
epithelial cell of tracheobronchial tree | 3.30e-10 | 9 |
epithelial cell of lower respiratory tract | 3.30e-10 | 9 |
squamous epithelial cell | 1.08e-09 | 63 |
mesothelial cell | 2.61e-09 | 19 |
transitional epithelial cell | 5.85e-09 | 4 |
urothelial cell | 5.85e-09 | 4 |
embryonic cell | 6.06e-09 | 250 |
duct epithelial cell | 6.41e-07 | 3 |
branched duct epithelial cell | 6.41e-07 | 3 |
tracheal epithelial cell | 6.41e-07 | 3 |
tracheoblast | 6.41e-07 | 3 |
bronchial epithelial cell | 8.64e-07 | 3 |
epithelial cell of Malassez | 9.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.50e-11 | 14 |
membranous layer | 2.50e-11 | 14 |
extraembryonic structure | 5.15e-11 | 24 |
respiratory system | 9.56e-09 | 74 |
respiratory tract | 1.17e-08 | 54 |
endoderm-derived structure | 2.98e-08 | 160 |
endoderm | 2.98e-08 | 160 |
presumptive endoderm | 2.98e-08 | 160 |
respiratory primordium | 1.36e-07 | 38 |
endoderm of foregut | 1.36e-07 | 38 |
larynx | 1.88e-07 | 9 |
urothelium | 4.24e-07 | 5 |
lower respiratory tract epithelium | 8.64e-07 | 3 |
epithelium of bronchus | 8.64e-07 | 3 |