FFCP PHASE1:Hg19::chr21:46974882..46974900,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:46974882..46974900,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr21:46974882..46974900,- | |description=CAGE_peak_at_chr21:46974882..46974900,- | ||
|id=chr21:46974882..46974900,- | |id=chr21:46974882..46974900,- | ||
|ontology_enrichment_celltype=CL:0002057!2.10e-27!42;CL:0000766!5.67e-27!76;CL:0000860!1.72e-26!45;CL:0000557!2.09e-18!71;CL:0000839!1.27e-17!70;CL:0002009!3.67e-17!65;CL:0002194!8.52e-17!63;CL:0000576!8.52e-17!63;CL:0000040!8.52e-17!63;CL:0000559!8.52e-17!63;CL:0000763!1.07e-16!112;CL:0000049!1.07e-16!112;CL:0000738!6.61e-16!140;CL:0000094!2.55e-13!8;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000081!2.39e-11!11;CL:0000988!3.23e-11!182;CL:0002032!1.46e-10!165;CL:0000837!1.46e-10!165;CL:0002087!6.24e-10!119;CL:0002031!9.70e-10!124;CL:0002393!5.95e-08!9;CL:0002397!5.95e-08!9 | |ontology_enrichment_celltype=CL:0002057!2.10e-27!42;CL:0000766!5.67e-27!76;CL:0000860!1.72e-26!45;CL:0000557!2.09e-18!71;CL:0000839!1.27e-17!70;CL:0002009!3.67e-17!65;CL:0002194!8.52e-17!63;CL:0000576!8.52e-17!63;CL:0000040!8.52e-17!63;CL:0000559!8.52e-17!63;CL:0000763!1.07e-16!112;CL:0000049!1.07e-16!112;CL:0000738!6.61e-16!140;CL:0000094!2.55e-13!8;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000081!2.39e-11!11;CL:0000988!3.23e-11!182;CL:0002032!1.46e-10!165;CL:0000837!1.46e-10!165;CL:0002087!6.24e-10!119;CL:0002031!9.70e-10!124;CL:0002393!5.95e-08!9;CL:0002397!5.95e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.27e-30;8!CL:0000775;3.26e-30;3!CL:0000081;2.87e-22;11!CL:0000771;1.38e-20;2!CL:0002393;3.61e-15;6!CL:0002397;3.61e-15;6!CL:0000766;7.57e-09;69!CL:0000576;1.02e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.23e-30,8;CL:0000775,3.11e-30,3;CL:0000081,2.81e-22,11;CL:0000771,1.39e-20,2;CL:0000766,4.25e-20,72;CL:0000860,2.03e-13,42;CL:0002057,2.03e-13,42;CL:0000763,8.92e-13,108;CL:0000049,8.92e-13,108;CL:0000473,1.27e-11,48;CL:0000234,1.27e-11,48;CL:0002393,2.70e-10,9;CL:0002397,2.70e-10,9;CL:0000738,9.83e-10,136;CL:0002194,4.20e-09,59;CL:0000576,4.20e-09,59;CL:0000040,4.20e-09,59;CL:0000559,4.20e-09,59;CL:0002009,8.88e-09,61;CL:0000839,4.75e-08,66;CL:0000557,6.45e-08,67;CL:0002032,6.65e-08,161;CL:0000837,6.65e-08,161;CL:0000037,1.73e-07,168;CL:0000988,5.31e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.39e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.26e-21!102;UBERON:0003061!4.26e-21!102;UBERON:0002193!7.78e-19!112;UBERON:0002371!3.63e-16!80;UBERON:0001474!3.84e-15!86;UBERON:0007023!5.31e-15!115;UBERON:0001049!2.34e-14!57;UBERON:0005068!2.34e-14!57;UBERON:0006241!2.34e-14!57;UBERON:0007135!2.34e-14!57;UBERON:0004765!4.12e-12!101;UBERON:0001434!4.12e-12!101;UBERON:0002616!2.54e-11!59;UBERON:0002405!9.53e-11!115;UBERON:0002020!2.99e-10!34;UBERON:0003528!2.99e-10!34;UBERON:0002780!5.16e-10!41;UBERON:0001890!5.16e-10!41;UBERON:0006240!5.16e-10!41;UBERON:0003075!1.07e-09!86;UBERON:0007284!1.07e-09!86;UBERON:0003080!1.20e-09!42;UBERON:0002346!1.44e-09!90;UBERON:0002791!2.44e-09!33;UBERON:0000955!3.86e-09!69;UBERON:0006238!3.86e-09!69;UBERON:0001893!6.20e-09!34;UBERON:0001017!1.08e-08!82;UBERON:0005743!6.27e-08!86;UBERON:0002420!1.29e-07!9;UBERON:0007245!1.29e-07!9;UBERON:0010009!1.29e-07!9;UBERON:0010011!1.29e-07!9;UBERON:0000454!1.29e-07!9;UBERON:0000073!1.37e-07!94;UBERON:0001016!1.37e-07!94;UBERON:0000349!1.53e-07!5;UBERON:0001869!2.18e-07!32;UBERON:0002308!2.83e-07!9;UBERON:0000125!2.83e-07!9 | |ontology_enrichment_uberon=UBERON:0002390!4.26e-21!102;UBERON:0003061!4.26e-21!102;UBERON:0002193!7.78e-19!112;UBERON:0002371!3.63e-16!80;UBERON:0001474!3.84e-15!86;UBERON:0007023!5.31e-15!115;UBERON:0001049!2.34e-14!57;UBERON:0005068!2.34e-14!57;UBERON:0006241!2.34e-14!57;UBERON:0007135!2.34e-14!57;UBERON:0004765!4.12e-12!101;UBERON:0001434!4.12e-12!101;UBERON:0002616!2.54e-11!59;UBERON:0002405!9.53e-11!115;UBERON:0002020!2.99e-10!34;UBERON:0003528!2.99e-10!34;UBERON:0002780!5.16e-10!41;UBERON:0001890!5.16e-10!41;UBERON:0006240!5.16e-10!41;UBERON:0003075!1.07e-09!86;UBERON:0007284!1.07e-09!86;UBERON:0003080!1.20e-09!42;UBERON:0002346!1.44e-09!90;UBERON:0002791!2.44e-09!33;UBERON:0000955!3.86e-09!69;UBERON:0006238!3.86e-09!69;UBERON:0001893!6.20e-09!34;UBERON:0001017!1.08e-08!82;UBERON:0005743!6.27e-08!86;UBERON:0002420!1.29e-07!9;UBERON:0007245!1.29e-07!9;UBERON:0010009!1.29e-07!9;UBERON:0010011!1.29e-07!9;UBERON:0000454!1.29e-07!9;UBERON:0000073!1.37e-07!94;UBERON:0001016!1.37e-07!94;UBERON:0000349!1.53e-07!5;UBERON:0001869!2.18e-07!32;UBERON:0002308!2.83e-07!9;UBERON:0000125!2.83e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;1.05e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,6.14e-11,1;UBERON:0002390,4.83e-08,98;UBERON:0003061,4.83e-08,98;UBERON:0002193,3.60e-07,108;UBERON:0002371,7.08e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,0,3.32397245119126,4.01088894940283,2.60413044859022,0,0.32389366601898,0,0.726991193897824,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0.863077176966451,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,1.31940520074686,0.398927315243264,1.27867425159808,0.290209238628584,1.13477044938228,0,1.00499466102697,1.5644487552606,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0.600707571366025,0.32145117339416,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0,0,0.32592226663359,0.473447805734733,1.94826728407911,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,7.49007023947182,11.966458368161,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,1.52927441428475,0.569647187174163,0,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0.329607748453519,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.884634079449797,0.295547618953547,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0.202203398942031,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0.776503360757966,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.478901577171454,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.826747186004736,0,0,0,0,0,0,0.535701835878287,0,0,2.27662191351298,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.413731983447581,0,0.23806443146374,0.0645889098360061,0.31037357147929,0,0.0636471582781649,0,0,0,0.134704106029175,0.430333232356058,0,0,0,0,0,0,0,0,1.99727032255654,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,0,3.32397245119126,4.01088894940283,2.60413044859022,0,0.32389366601898,0,0.726991193897824,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0.863077176966451,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,1.31940520074686,0.398927315243264,1.27867425159808,0.290209238628584,1.13477044938228,0,1.00499466102697,1.5644487552606,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0.600707571366025,0.32145117339416,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0,0,0.32592226663359,0.473447805734733,1.94826728407911,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,7.49007023947182,11.966458368161,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,1.52927441428475,0.569647187174163,0,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0.329607748453519,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.884634079449797,0.295547618953547,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0.202203398942031,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0.776503360757966,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.478901577171454,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.826747186004736,0,0,0,0,0,0,0.535701835878287,0,0,2.27662191351298,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.413731983447581,0,0.23806443146374,0.0645889098360061,0.31037357147929,0,0.0636471582781649,0,0,0,0.134704106029175,0.430333232356058,0,0,0,0,0,0,0,0,1.99727032255654,0,0 | ||
|short_description=p@chr21:46974882..46974900,- | |short_description=p@chr21:46974882..46974900,- | ||
}} | }} |
Latest revision as of 18:39, 28 July 2015
Short description: | p@chr21:46974882..46974900, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46974882..46974900, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.23e-30 | 8 |
neutrophil | 3.11e-30 | 3 |
blood cell | 2.81e-22 | 11 |
eosinophil | 1.39e-20 | 2 |
myeloid leukocyte | 4.25e-20 | 72 |
classical monocyte | 2.03e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-13 | 42 |
myeloid cell | 8.92e-13 | 108 |
common myeloid progenitor | 8.92e-13 | 108 |
defensive cell | 1.27e-11 | 48 |
phagocyte | 1.27e-11 | 48 |
intermediate monocyte | 2.70e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.70e-10 | 9 |
leukocyte | 9.83e-10 | 136 |
monopoietic cell | 4.20e-09 | 59 |
monocyte | 4.20e-09 | 59 |
monoblast | 4.20e-09 | 59 |
promonocyte | 4.20e-09 | 59 |
macrophage dendritic cell progenitor | 8.88e-09 | 61 |
myeloid lineage restricted progenitor cell | 4.75e-08 | 66 |
granulocyte monocyte progenitor cell | 6.45e-08 | 67 |
hematopoietic oligopotent progenitor cell | 6.65e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.65e-08 | 161 |
hematopoietic stem cell | 1.73e-07 | 168 |
hematopoietic cell | 5.31e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vagina | 6.14e-11 | 1 |
hematopoietic system | 4.83e-08 | 98 |
blood island | 4.83e-08 | 98 |
hemolymphoid system | 3.60e-07 | 108 |
bone marrow | 7.08e-07 | 76 |