FFCP PHASE1:Hg19::chr21:47405885..47405896,+: Difference between revisions
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|id=chr21:47405885..47405896,+
|short_description=p@chr21:47405885..47405896,+
|description=CAGE_peak_at_chr21:47405885..47405896,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47405885..47405896,+ | |||
|description=CAGE_peak_at_chr21:47405885..47405896,+ | |||
|id=chr21:47405885..47405896,+ | |||
|ontology_enrichment_celltype=CL:0002570!3.08e-41!8;CL:0000057!2.08e-18!75;CL:0000346!3.81e-17!3;CL:1000428!3.81e-17!3;CL:0002582!3.69e-16!3;CL:0002559!5.53e-13!4;CL:0002583!8.83e-12!2;CL:0002334!8.88e-11!12;CL:0000134!4.68e-10!358;CL:0002620!5.41e-10!23;CL:0002320!9.90e-10!365;CL:0000048!1.59e-09!430;CL:0000723!2.71e-09!436;CL:0000034!5.38e-09!444;CL:0000219!1.39e-08!390;CL:0000055!7.80e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002570;4.93e-55;8!CL:0000346;4.76e-38;3!CL:1000428;4.76e-38;3!CL:0002583;1.05e-25;2!CL:0002559;3.89e-23;5!CL:0000723;9.45e-12;61!CL:0000048;3.06e-11;58!CL:0002552;5.03e-11;5!CL:0000134;7.87e-10;55!CL:0000034;1.05e-08;69!CL:0002363;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,5.68e-55,8;CL:0000346,4.48e-38,3;CL:1000428,4.48e-38,3;CL:0002583,1.85e-25,2;CL:0002559,3.75e-23,5;CL:0002552,4.12e-11,5;CL:0002363,1.05e-07,2;CL:0000008,1.05e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000008;1.05e-07;2 | |||
|ontology_enrichment_disease=DOID:17!1.88e-16!5;DOID:450!1.88e-16!5;DOID:66!1.88e-16!5;DOID:423!1.88e-16!5;DOID:0080000!1.88e-16!5;DOID:11722!1.88e-16!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.96e-29!14;UBERON:0002199!8.45e-20!45;UBERON:0002416!8.45e-20!45;UBERON:0000412!3.81e-17!3;UBERON:0001992!3.81e-17!3;UBERON:0003102!9.69e-16!95;UBERON:0002067!1.04e-14!9;UBERON:0004016!1.04e-14!9;UBERON:0010083!1.04e-14!9;UBERON:0002097!1.37e-13!40;UBERON:0002073!5.53e-13!4;UBERON:0005086!5.53e-13!4;UBERON:0002072!2.50e-10!5;UBERON:0002384!2.75e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.26e-42;14!UBERON:0000412;4.76e-38;3!UBERON:0001992;4.76e-38;3!UBERON:0002073;3.89e-23;5!UBERON:0002072;5.45e-23;5!UBERON:0002067;3.81e-13;9!UBERON:0003102;1.46e-08;50!UBERON:0001003;4.17e-08;15!UBERON:0007376;4.17e-08;15!UBERON:0003566;1.05e-07;2!UBERON:0001777;1.05e-07;2!UBERON:0001828;3.24e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.52e-42,14;UBERON:0000412,4.48e-38,3;UBERON:0001992,4.48e-38,3;UBERON:0002073,3.75e-23,5;UBERON:0005086,3.75e-23,5;UBERON:0002072,8.56e-23,5;UBERON:0002067,3.74e-13,9;UBERON:0004016,3.74e-13,9;UBERON:0010083,3.74e-13,9;UBERON:0003102,2.00e-11,99;UBERON:0002199,2.04e-09,46;UBERON:0002416,2.04e-09,46;UBERON:0001003,4.12e-08,15;UBERON:0007376,4.12e-08,15;UBERON:0007383,4.12e-08,15;UBERON:0003566,1.05e-07,2;UBERON:0001777,1.05e-07,2;UBERON:0001828,2.86e-07,8;UBERON:0005085,9.68e-07,31;UBERON:0002384,9.92e-07,371 | |||
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|short_description=p@chr21:47405885..47405896,+ | |||
}} | }} |
Latest revision as of 18:41, 28 July 2015
Short description: | p@chr21:47405885..47405896, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47405885..47405896, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 5.68e-55 | 8 |
hair follicle dermal papilla cell | 4.48e-38 | 3 |
stem cell of epidermis | 4.48e-38 | 3 |
subcutaneous preadipocyte | 1.85e-25 | 2 |
hair follicle cell | 3.75e-23 | 5 |
fibroblast of gingiva | 4.12e-11 | 5 |
keratocyte | 1.05e-07 | 2 |
migratory cranial neural crest cell | 1.05e-07 | 2 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.52e-42 | 14 |
dermal papilla | 4.48e-38 | 3 |
papillary layer of dermis | 4.48e-38 | 3 |
hair follicle | 3.75e-23 | 5 |
hair follicle placode | 3.75e-23 | 5 |
hypodermis | 8.56e-23 | 5 |
dermis | 3.74e-13 | 9 |
dermatome | 3.74e-13 | 9 |
future dermis | 3.74e-13 | 9 |
surface structure | 2.00e-11 | 99 |
integument | 2.04e-09 | 46 |
integumental system | 2.04e-09 | 46 |
skin epidermis | 4.12e-08 | 15 |
outer epithelium | 4.12e-08 | 15 |
enveloping layer of ectoderm | 4.12e-08 | 15 |
head connective tissue | 1.05e-07 | 2 |
substantia propria of cornea | 1.05e-07 | 2 |
gingiva | 2.86e-07 | 8 |
ectodermal placode | 9.68e-07 | 31 |
connective tissue | 9.92e-07 | 371 |