FFCP PHASE1:Hg19::chr22:51111188..51111201,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:51111188..51111201,+ | |||
|coexpression_cluster_id=C2652 | |||
|description=CAGE_peak_at_chr22:51111188..51111201,+ | |description=CAGE_peak_at_chr22:51111188..51111201,+ | ||
|id=chr22:51111188..51111201,+ | |id=chr22:51111188..51111201,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.35e-29!24;CL:0000115!1.47e-27!35;CL:0000071!1.06e-22!18;CL:0002546!1.06e-22!18;CL:0002078!1.16e-19!44;CL:0000213!7.67e-13!57;CL:0000215!7.67e-13!57;CL:1000413!2.95e-12!9;CL:0002543!4.04e-09!6;CL:0002544!1.49e-08!6;CL:0005020!3.41e-08!6;CL:0002138!3.41e-08!6;CL:0005022!3.41e-08!6 | |ontology_enrichment_celltype=CL:0002139!2.35e-29!24;CL:0000115!1.47e-27!35;CL:0000071!1.06e-22!18;CL:0002546!1.06e-22!18;CL:0002078!1.16e-19!44;CL:0000213!7.67e-13!57;CL:0000215!7.67e-13!57;CL:1000413!2.95e-12!9;CL:0002543!4.04e-09!6;CL:0002544!1.49e-08!6;CL:0005020!3.41e-08!6;CL:0002138!3.41e-08!6;CL:0005022!3.41e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.64e-39;24!CL:0000115;2.44e-33;36!CL:0000071;4.36e-30;18!CL:0002078;1.07e-18;45!CL:1000413;5.14e-16;9!CL:0000213;3.71e-13;58!CL:0000215;3.71e-13;58!CL:0002543;1.01e-11;6!CL:0002544;5.04e-11;6!CL:0002138;1.76e-10;6!CL:0002618;7.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.80e-39,36;CL:0002139,5.72e-39,24;CL:0000071,5.33e-30,18;CL:0002546,5.33e-30,18;CL:0002078,2.39e-29,45;CL:0000213,1.55e-20,58;CL:0000215,1.55e-20,58;CL:1000413,6.21e-16,9;CL:0002543,1.01e-11,6;CL:0002544,5.84e-11,6;CL:0005020,1.78e-10,6;CL:0002138,1.78e-10,6;CL:0005022,1.78e-10,6;CL:0002618,7.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.36e-30;18!CL:0005022;1.76e-10;6!UBERON:0004872;5.53e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;3.84e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.26e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.13e-55!115;UBERON:0004111!9.43e-24!241;UBERON:0001049!2.48e-23!57;UBERON:0005068!2.48e-23!57;UBERON:0006241!2.48e-23!57;UBERON:0007135!2.48e-23!57;UBERON:0001986!1.06e-22!18;UBERON:0004638!1.06e-22!18;UBERON:0004852!1.06e-22!18;UBERON:0000025!4.36e-22!194;UBERON:0000477!4.16e-20!286;UBERON:0002616!2.79e-18!59;UBERON:0003080!3.76e-18!42;UBERON:0000487!2.37e-17!22;UBERON:0002780!4.03e-17!41;UBERON:0001890!4.03e-17!41;UBERON:0006240!4.03e-17!41;UBERON:0003075!2.69e-16!86;UBERON:0007284!2.69e-16!86;UBERON:0002346!5.82e-15!90;UBERON:0006914!1.72e-14!25;UBERON:0000955!2.05e-14!69;UBERON:0006238!2.05e-14!69;UBERON:0002020!2.90e-14!34;UBERON:0003528!2.90e-14!34;UBERON:0001893!4.75e-14!34;UBERON:0001017!7.99e-14!82;UBERON:0002791!1.74e-13!33;UBERON:0005743!1.81e-13!86;UBERON:0001869!7.11e-13!32;UBERON:0003915!2.95e-12!9;UBERON:0004700!2.95e-12!9;UBERON:0001917!2.95e-12!9;UBERON:0000055!1.70e-11!69;UBERON:0002619!1.81e-11!22;UBERON:0000483!2.76e-11!309;UBERON:0000073!4.70e-11!94;UBERON:0001016!4.70e-11!94;UBERON:0000119!6.15e-11!312;UBERON:0003056!1.43e-10!61;UBERON:0001950!3.84e-10!20;UBERON:0000956!1.46e-09!25;UBERON:0000203!1.46e-09!25;UBERON:0004872!2.60e-09!84;UBERON:0002049!8.49e-09!79;UBERON:0007798!8.49e-09!79;UBERON:0001981!1.80e-08!60;UBERON:0007500!1.80e-08!60;UBERON:0004537!1.80e-08!60;UBERON:0006965!1.80e-08!60;UBERON:0001009!5.81e-08!113;UBERON:0002298!9.76e-08!8;UBERON:0001638!1.72e-07!9;UBERON:0003920!1.72e-07!9;UBERON:0004582!1.72e-07!9;UBERON:0002465!3.16e-07!10;UBERON:0000153!5.40e-07!129;UBERON:0007811!5.40e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!8.13e-55!115;UBERON:0004111!9.43e-24!241;UBERON:0001049!2.48e-23!57;UBERON:0005068!2.48e-23!57;UBERON:0006241!2.48e-23!57;UBERON:0007135!2.48e-23!57;UBERON:0001986!1.06e-22!18;UBERON:0004638!1.06e-22!18;UBERON:0004852!1.06e-22!18;UBERON:0000025!4.36e-22!194;UBERON:0000477!4.16e-20!286;UBERON:0002616!2.79e-18!59;UBERON:0003080!3.76e-18!42;UBERON:0000487!2.37e-17!22;UBERON:0002780!4.03e-17!41;UBERON:0001890!4.03e-17!41;UBERON:0006240!4.03e-17!41;UBERON:0003075!2.69e-16!86;UBERON:0007284!2.69e-16!86;UBERON:0002346!5.82e-15!90;UBERON:0006914!1.72e-14!25;UBERON:0000955!2.05e-14!69;UBERON:0006238!2.05e-14!69;UBERON:0002020!2.90e-14!34;UBERON:0003528!2.90e-14!34;UBERON:0001893!4.75e-14!34;UBERON:0001017!7.99e-14!82;UBERON:0002791!1.74e-13!33;UBERON:0005743!1.81e-13!86;UBERON:0001869!7.11e-13!32;UBERON:0003915!2.95e-12!9;UBERON:0004700!2.95e-12!9;UBERON:0001917!2.95e-12!9;UBERON:0000055!1.70e-11!69;UBERON:0002619!1.81e-11!22;UBERON:0000483!2.76e-11!309;UBERON:0000073!4.70e-11!94;UBERON:0001016!4.70e-11!94;UBERON:0000119!6.15e-11!312;UBERON:0003056!1.43e-10!61;UBERON:0001950!3.84e-10!20;UBERON:0000956!1.46e-09!25;UBERON:0000203!1.46e-09!25;UBERON:0004872!2.60e-09!84;UBERON:0002049!8.49e-09!79;UBERON:0007798!8.49e-09!79;UBERON:0001981!1.80e-08!60;UBERON:0007500!1.80e-08!60;UBERON:0004537!1.80e-08!60;UBERON:0006965!1.80e-08!60;UBERON:0001009!5.81e-08!113;UBERON:0002298!9.76e-08!8;UBERON:0001638!1.72e-07!9;UBERON:0003920!1.72e-07!9;UBERON:0004582!1.72e-07!9;UBERON:0002465!3.16e-07!10;UBERON:0000153!5.40e-07!129;UBERON:0007811!5.40e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.36e-30;18!UBERON:0001986;4.36e-30;18!UBERON:0004852;4.36e-30;18!UBERON:0000487;1.58e-23;22!UBERON:0006914;5.28e-20;25!UBERON:0003915;5.14e-16;9!UBERON:0004700;5.14e-16;9!UBERON:0001917;5.14e-16;9!UBERON:0000490;9.72e-13;33!UBERON:0001638;6.95e-10;9!UBERON:0003920;6.95e-10;9!UBERON:0004582;6.95e-10;9!UBERON:0000055;6.91e-09;65!UBERON:0002465;1.11e-07;10!UBERON:0001473;1.29e-07;8!UBERON:0004536;1.29e-07;8!UBERON:0006558;1.29e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.33e-30,18;UBERON:0001986,5.33e-30,18;UBERON:0004852,5.33e-30,18;UBERON:0000487,1.85e-23,22;UBERON:0007023,1.56e-21,114;UBERON:0006914,6.06e-20,25;UBERON:0000055,2.87e-17,68;UBERON:0003915,6.21e-16,9;UBERON:0004700,6.21e-16,9;UBERON:0001917,6.21e-16,9;UBERON:0002049,7.68e-14,78;UBERON:0007798,7.68e-14,78;UBERON:0007500,9.79e-13,59;UBERON:0001981,9.79e-13,59;UBERON:0004537,9.79e-13,59;UBERON:0006965,9.79e-13,59;UBERON:0004872,3.67e-12,83;UBERON:0001009,1.76e-11,112;UBERON:0004111,2.29e-11,240;UBERON:0001638,7.39e-10,9;UBERON:0003920,7.39e-10,9;UBERON:0004582,7.39e-10,9;UBERON:0004535,1.43e-09,109;UBERON:0000025,1.91e-09,192;UBERON:0003914,2.24e-08,117;UBERON:0002465,1.08e-07,10;UBERON:0001473,1.30e-07,8;UBERON:0004536,1.30e-07,8;UBERON:0006558,1.30e-07,8 | |||
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| ||
|short_description=p@chr22:51111188..51111201,+ | |short_description=p@chr22:51111188..51111201,+ | ||
}} | }} |
Latest revision as of 22:35, 28 July 2015
Short description: | p@chr22:51111188..51111201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:51111188..51111201, + |
Coexpression cluster: | C2652_acute_Hepatic_Endothelial_Renal_heart_breast_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.80e-39 | 36 |
endothelial cell of vascular tree | 5.72e-39 | 24 |
blood vessel endothelial cell | 5.33e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.33e-30 | 18 |
meso-epithelial cell | 2.39e-29 | 45 |
lining cell | 1.55e-20 | 58 |
barrier cell | 1.55e-20 | 58 |
endothelial cell of artery | 6.21e-16 | 9 |
vein endothelial cell | 1.01e-11 | 6 |
aortic endothelial cell | 5.84e-11 | 6 |
lymphangioblast | 1.78e-10 | 6 |
endothelial cell of lymphatic vessel | 1.78e-10 | 6 |
vascular lymphangioblast | 1.78e-10 | 6 |
endothelial cell of umbilical vein | 7.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.33e-30 | 18 |
endothelium | 5.33e-30 | 18 |
cardiovascular system endothelium | 5.33e-30 | 18 |
simple squamous epithelium | 1.85e-23 | 22 |
adult organism | 1.56e-21 | 114 |
squamous epithelium | 6.06e-20 | 25 |
vessel | 2.87e-17 | 68 |
endothelial tube | 6.21e-16 | 9 |
arterial system endothelium | 6.21e-16 | 9 |
endothelium of artery | 6.21e-16 | 9 |
vasculature | 7.68e-14 | 78 |
vascular system | 7.68e-14 | 78 |
epithelial tube open at both ends | 9.79e-13 | 59 |
blood vessel | 9.79e-13 | 59 |
blood vasculature | 9.79e-13 | 59 |
vascular cord | 9.79e-13 | 59 |
splanchnic layer of lateral plate mesoderm | 3.67e-12 | 83 |
circulatory system | 1.76e-11 | 112 |
anatomical conduit | 2.29e-11 | 240 |
vein | 7.39e-10 | 9 |
venous blood vessel | 7.39e-10 | 9 |
venous system | 7.39e-10 | 9 |
cardiovascular system | 1.43e-09 | 109 |
tube | 1.91e-09 | 192 |
epithelial tube | 2.24e-08 | 117 |
lymphoid system | 1.08e-07 | 10 |
lymphatic vessel | 1.30e-07 | 8 |
lymph vasculature | 1.30e-07 | 8 |
lymphatic part of lymphoid system | 1.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.26e-07 | 31 |