FFCP PHASE1:Hg19::chr2:121669351..121669360,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:121669351..121669360,- | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr2:121669351..121669360,- | |description=CAGE_peak_at_chr2:121669351..121669360,- | ||
|id=chr2:121669351..121669360,- | |id=chr2:121669351..121669360,- | ||
|ontology_enrichment_celltype=CL:0000066!4.50e-14!254;CL:0000077!1.63e-10!19;CL:0002368!3.52e-09!13;CL:0002202!2.45e-07!9;CL:0002632!2.45e-07!9 | |ontology_enrichment_celltype=CL:0000066!4.50e-14!254;CL:0000077!1.63e-10!19;CL:0002368!3.52e-09!13;CL:0002202!2.45e-07!9;CL:0002632!2.45e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.96e-13;19!CL:0002097;3.81e-12;2!CL:0000174;2.20e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.42e-19,253;CL:0000077,3.02e-13,19;CL:0002097,5.19e-12,2;CL:0000174,2.70e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.40e-18;29 | |||
|ontology_enrichment_disease=DOID:305!1.52e-16!106;DOID:162!7.19e-16!235;DOID:14566!4.43e-15!239;DOID:0050687!2.25e-14!143 | |ontology_enrichment_disease=DOID:305!1.52e-16!106;DOID:162!7.19e-16!235;DOID:14566!4.43e-15!239;DOID:0050687!2.25e-14!143 | ||
|ontology_enrichment_disease_v019=DOID:299;4.49e-13;25!DOID:4929;3.60e-12;2!DOID:305;3.20e-09;106!DOID:170;8.25e-09;6!DOID:3111;4.13e-07;1!DOID:3603;4.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.72e-28,106;DOID:0050687,2.37e-23,143;DOID:162,6.13e-17,235;DOID:14566,1.85e-16,239;DOID:299,4.57e-13,25;DOID:4929,3.13e-12,2;DOID:170,8.95e-09,6;DOID:3111,4.01e-07,1;DOID:3603,4.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.25e-15!9;UBERON:0008947!1.69e-13!38;UBERON:0003258!1.69e-13!38;UBERON:0000065!1.49e-12!53;UBERON:0000072!6.92e-11!46;UBERON:0001004!1.37e-08!72;UBERON:0001557!7.86e-07!19 | |ontology_enrichment_uberon=UBERON:0001737!5.25e-15!9;UBERON:0008947!1.69e-13!38;UBERON:0003258!1.69e-13!38;UBERON:0000065!1.49e-12!53;UBERON:0000072!6.92e-11!46;UBERON:0001004!1.37e-08!72;UBERON:0001557!7.86e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.32e-52;9!UBERON:0001557;5.32e-52;9!UBERON:0000072;7.23e-18;37!UBERON:0000065;2.07e-14;44!UBERON:0002369;2.20e-08;3!UBERON:0001235;2.20e-08;3!UBERON:0006858;2.20e-08;3!UBERON:0001004;1.03e-07;65!UBERON:0004913;3.57e-07;1!UBERON:0003703;3.57e-07;1!UBERON:0001174;3.57e-07;1!UBERON:0004914;3.57e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.34e-52,9;UBERON:0001557,8.01e-24,19;UBERON:0008947,9.59e-20,38;UBERON:0003258,9.59e-20,38;UBERON:0000072,1.70e-15,47;UBERON:0000065,3.59e-13,54;UBERON:0001041,3.98e-10,87;UBERON:0001004,5.78e-09,74;UBERON:0002369,2.70e-08,3;UBERON:0001235,2.70e-08,3;UBERON:0006858,2.70e-08,3;UBERON:0004921,8.99e-08,118;UBERON:0004913,3.57e-07,1;UBERON:0003703,3.57e-07,1;UBERON:0001174,3.57e-07,1;UBERON:0004914,3.57e-07,1 | |||
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| ||
|short_description=p@chr2:121669351..121669360,- | |short_description=p@chr2:121669351..121669360,- | ||
}} | }} |
Latest revision as of 23:57, 28 July 2015
Short description: | p@chr2:121669351..121669360, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:121669351..121669360, - |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.42e-19 | 253 |
mesothelial cell | 3.02e-13 | 19 |
cortical cell of adrenal gland | 5.19e-12 | 2 |
steroid hormone secreting cell | 2.70e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.34e-52 | 9 |
upper respiratory tract | 8.01e-24 | 19 |
respiratory primordium | 9.59e-20 | 38 |
endoderm of foregut | 9.59e-20 | 38 |
segment of respiratory tract | 1.70e-15 | 47 |
respiratory tract | 3.59e-13 | 54 |
foregut | 3.98e-10 | 87 |
respiratory system | 5.78e-09 | 74 |
adrenal gland | 2.70e-08 | 3 |
adrenal cortex | 2.70e-08 | 3 |
adrenal/interrenal gland | 2.70e-08 | 3 |
subdivision of digestive tract | 8.99e-08 | 118 |
hepatopancreatic ampulla | 3.57e-07 | 1 |
extrahepatic bile duct | 3.57e-07 | 1 |
common bile duct | 3.57e-07 | 1 |
duodenal papilla | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.72e-28 | 106 |
cell type cancer | 2.37e-23 | 143 |
cancer | 6.13e-17 | 235 |
disease of cellular proliferation | 1.85e-16 | 239 |
adenocarcinoma | 4.57e-13 | 25 |
tubular adenocarcinoma | 3.13e-12 | 2 |
endocrine gland cancer | 8.95e-09 | 6 |
cystadenocarcinoma | 4.01e-07 | 1 |
mucinous cystadenocarcinoma | 4.01e-07 | 1 |