FFCP PHASE1:Hg19::chr2:16083539..16083543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:16083539..16083543,+ | |||
|coexpression_cluster_id=C135 | |coexpression_cluster_id=C135 | ||
|description=CAGE_peak_at_chr2:16083539..16083543,+ | |description=CAGE_peak_at_chr2:16083539..16083543,+ | ||
|id=chr2:16083539..16083543,+ | |id=chr2:16083539..16083543,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.77e-13!5;CL:0000039!2.88e-09!7;CL:0000586!2.88e-09!7 | |ontology_enrichment_celltype=CL:0002322!2.77e-13!5;CL:0000039!2.88e-09!7;CL:0000586!2.88e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.05e-32;5!CL:0002321;1.15e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.98e-09,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.42e-15;10!UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease=DOID:3095!8.06e-14!22;DOID:2994!8.06e-14!22;DOID:169!2.92e-07!6;DOID:171!3.50e-07!10 | |ontology_enrichment_disease=DOID:3095!8.06e-14!22;DOID:2994!8.06e-14!22;DOID:169!2.92e-07!6;DOID:171!3.50e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:169;1.82e-27;6!DOID:171;5.90e-17;10!DOID:3095;2.82e-08;22!DOID:2994;2.82e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.82e-27,6;DOID:171,5.90e-17,10;DOID:3095,2.82e-08,22;DOID:2994,2.82e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0002133!1.19e-09!2;UBERON:0000013!1.21e-08!5;UBERON:0002410!1.21e-08!5 | |ontology_enrichment_uberon=UBERON:0002133!1.19e-09!2;UBERON:0000013!1.21e-08!5;UBERON:0002410!1.21e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.05e-32;5!UBERON:0002410;1.05e-32;5!UBERON:0000010;1.03e-18;8!UBERON:0000966;3.10e-09;5!UBERON:0005388;3.10e-09;5!UBERON:0001802;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.05e-32,5;UBERON:0002410,1.05e-32,5;UBERON:0000010,1.03e-18,8;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0001016,1.50e-07,89 | |||
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| ||
|short_description=p@chr2:16083539..16083543,+ | |short_description=p@chr2:16083539..16083543,+ | ||
}} | }} |
Latest revision as of 01:48, 29 July 2015
Short description: | p@chr2:16083539..16083543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:16083539..16083543, + |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.98e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.05e-32 | 5 |
autonomic nervous system | 1.05e-32 | 5 |
peripheral nervous system | 1.03e-18 | 8 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
nervous system | 1.50e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.82e-27 | 6 |
neuroectodermal tumor | 5.90e-17 | 10 |
germ cell and embryonal cancer | 2.82e-08 | 22 |
germ cell cancer | 2.82e-08 | 22 |