FFCP PHASE1:Hg19::chr2:16085916..16085937,-: Difference between revisions
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|id=chr2:16085916..16085937,-
|short_description=p@chr2:16085916..16085937,-
|description=CAGE_peak_at_chr2:16085916..16085937,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:16085916..16085937,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_at_chr2:16085916..16085937,- | |||
|id=chr2:16085916..16085937,- | |||
|ontology_enrichment_celltype=CL:0002322!4.76e-32!5;CL:0000039!2.83e-23!7;CL:0000586!2.83e-23!7;CL:0000133!5.59e-11!59;CL:0000540!3.55e-10!6;CL:0000031!3.55e-10!6;CL:0000404!3.55e-10!6;CL:0000221!7.53e-09!71;CL:0000333!1.05e-08!41;CL:0000047!9.48e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.51e-53;5!CL:0002321;1.08e-18;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3!CL:0000221;1.07e-07;72!UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!4.74e-23!22;DOID:2994!4.74e-23!22;DOID:169!6.38e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:169;1.09e-44;6!DOID:171;2.22e-27;10!DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.76e-45,6;DOID:171,2.08e-27,10;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22;DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000013!5.21e-13!5;UBERON:0002410!5.21e-13!5;UBERON:0000473!4.88e-08!8;UBERON:0002336!1.75e-07!1;UBERON:0001018!1.75e-07!1;UBERON:0002473!1.75e-07!1;UBERON:0005340!1.75e-07!1;UBERON:0002316!1.75e-07!1;UBERON:0003544!1.75e-07!1;UBERON:0001020!1.75e-07!1;UBERON:0005970!1.75e-07!1;UBERON:0002437!1.75e-07!1;UBERON:0002581!1.87e-07!1;UBERON:0000010!2.01e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.51e-53;5!UBERON:0002410;2.51e-53;5!UBERON:0000010;2.87e-30;8!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.19e-53,5;UBERON:0002410,2.19e-53,5;UBERON:0000010,2.66e-30,8;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr2:16085916..16085937,- | |||
}} | }} |
Latest revision as of 01:49, 29 July 2015
Short description: | p@chr2:16085916..16085937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:16085916..16085937, - |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.19e-53 | 5 |
autonomic nervous system | 2.19e-53 | 5 |
peripheral nervous system | 2.66e-30 | 8 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.76e-45 | 6 |
neuroectodermal tumor | 2.08e-27 | 10 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |
nervous system cancer | 8.38e-07 | 11 |