FFCP PHASE1:Hg19::chr2:174562443..174562467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:174562443..174562467,+ | |||
|description=CAGE_peak_at_chr2:174562443..174562467,+ | |description=CAGE_peak_at_chr2:174562443..174562467,+ | ||
|id=chr2:174562443..174562467,+ | |id=chr2:174562443..174562467,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.22e-27!254;CL:0000223!5.11e-13!59;CL:0000082!1.33e-10!19;CL:0000039!3.12e-10!7;CL:0000586!3.12e-10!7;CL:0002076!1.32e-09!43;CL:0002251!5.63e-08!21;CL:0002322!3.17e-07!5;CL:0000083!8.47e-07!4 | |ontology_enrichment_celltype=CL:0000066!7.22e-27!254;CL:0000223!5.11e-13!59;CL:0000082!1.33e-10!19;CL:0000039!3.12e-10!7;CL:0000586!3.12e-10!7;CL:0002076!1.32e-09!43;CL:0002251!5.63e-08!21;CL:0002322!3.17e-07!5;CL:0000083!8.47e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000083;5.29e-09;4!CL:0000082;5.55e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.68e-22,253;CL:0000223,2.49e-11,58;CL:0000082,5.42e-09,19;CL:0000083,5.76e-09,4;CL:0002076,2.41e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.10e-08;30 | |||
|ontology_enrichment_disease=DOID:305!2.41e-54!106;DOID:0050687!1.21e-43!143;DOID:162!1.71e-31!235;DOID:14566!2.96e-30!239;DOID:1749!1.60e-17!14;DOID:0050615!8.74e-16!16;DOID:1324!1.99e-14!15;DOID:3905!8.95e-13!9;DOID:299!1.23e-12!25;DOID:0050686!5.15e-09!137;DOID:3095!8.64e-09!22;DOID:2994!8.64e-09!22;DOID:3908!1.37e-08!5;DOID:1325!2.07e-07!7;DOID:3904!2.07e-07!7;DOID:3119!2.98e-07!14;DOID:7!6.78e-07!39;DOID:1793!8.47e-07!4 | |ontology_enrichment_disease=DOID:305!2.41e-54!106;DOID:0050687!1.21e-43!143;DOID:162!1.71e-31!235;DOID:14566!2.96e-30!239;DOID:1749!1.60e-17!14;DOID:0050615!8.74e-16!16;DOID:1324!1.99e-14!15;DOID:3905!8.95e-13!9;DOID:299!1.23e-12!25;DOID:0050686!5.15e-09!137;DOID:3095!8.64e-09!22;DOID:2994!8.64e-09!22;DOID:3908!1.37e-08!5;DOID:1325!2.07e-07!7;DOID:3904!2.07e-07!7;DOID:3119!2.98e-07!14;DOID:7!6.78e-07!39;DOID:1793!8.47e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.53e-25;14!DOID:3905;9.69e-15;9!DOID:305;2.76e-14;106!DOID:0050615;3.85e-14;16!DOID:3908;1.42e-12;5!DOID:1324;1.20e-11;15!DOID:1793;5.29e-09;4!DOID:1325;5.41e-09;7!DOID:3904;5.41e-09;7!DOID:3910;6.07e-09;2!DOID:0050687;9.20e-09;143!DOID:4929;1.27e-08;2!DOID:4074;3.77e-08;2!DOID:4905;3.77e-08;2!DOID:3498;3.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.28e-51,106;DOID:0050687,1.55e-37,143;DOID:162,1.35e-28,235;DOID:14566,8.68e-28,239;DOID:1749,1.51e-25,14;DOID:3905,8.62e-15,9;DOID:0050615,3.87e-14,16;DOID:3908,1.03e-12,5;DOID:1324,1.16e-11,15;DOID:3910,4.45e-09,2;DOID:1325,5.20e-09,7;DOID:3904,5.20e-09,7;DOID:1793,5.76e-09,4;DOID:4929,8.64e-09,2;DOID:0050686,9.74e-09,137;DOID:4074,4.07e-08,2;DOID:4905,4.07e-08,2;DOID:3498,4.07e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.80e-14!169;UBERON:0000925!2.80e-14!169;UBERON:0006595!2.80e-14!169;UBERON:0001007!1.43e-12!155;UBERON:0001555!1.43e-12!155;UBERON:0007026!1.43e-12!155;UBERON:0000077!3.03e-11!130;UBERON:0004921!3.56e-11!129;UBERON:0004185!3.56e-11!129;UBERON:0004802!1.33e-10!19;UBERON:0000115!1.33e-10!19;UBERON:0005911!2.04e-10!82;UBERON:0001041!1.57e-09!98;UBERON:0002048!1.14e-08!22;UBERON:0000117!1.14e-08!22;UBERON:0000171!1.14e-08!22;UBERON:0000170!1.14e-08!22;UBERON:0005597!1.14e-08!22;UBERON:0000118!1.14e-08!22;UBERON:0000466!2.59e-08!126;UBERON:0004807!2.71e-08!28;UBERON:0005153!5.34e-08!37;UBERON:0000464!8.20e-08!104;UBERON:0003343!1.26e-07!4;UBERON:0004785!1.26e-07!4;UBERON:0002075!2.51e-07!18;UBERON:0001004!3.83e-07!72;UBERON:0005177!6.40e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.63e-16;4!UBERON:0004785;1.63e-16;4!UBERON:0000974;5.07e-11;6!UBERON:0004802;5.55e-09;19!UBERON:0000115;5.55e-09;19!UBERON:0004903;6.07e-09;2!UBERON:0002173;6.07e-09;2!UBERON:0002186;6.07e-09;2!UBERON:0002048;1.28e-07;22!UBERON:0004807;1.28e-07;22!UBERON:0000117;1.28e-07;22!UBERON:0000171;1.28e-07;22!UBERON:0000170;1.28e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.84e-16,4;UBERON:0004785,1.84e-16,4;UBERON:0004903,4.45e-09,2;UBERON:0002173,4.45e-09,2;UBERON:0002186,4.45e-09,2;UBERON:0004802,5.42e-09,19;UBERON:0000115,5.42e-09,19;UBERON:0002048,1.25e-07,22;UBERON:0000117,1.25e-07,22;UBERON:0000171,1.25e-07,22;UBERON:0000170,1.25e-07,22;UBERON:0005597,1.25e-07,22;UBERON:0000118,1.25e-07,22 | |||
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| ||
|short_description=p@chr2:174562443..174562467,+ | |short_description=p@chr2:174562443..174562467,+ | ||
}} | }} |
Latest revision as of 02:34, 29 July 2015
Short description: | p@chr2:174562443..174562467, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:174562443..174562467, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.68e-22 | 253 |
endodermal cell | 2.49e-11 | 58 |
epithelial cell of lung | 5.42e-09 | 19 |
epithelial cell of pancreas | 5.76e-09 | 4 |
endo-epithelial cell | 2.41e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.84e-16 | 4 |
respiratory system mucosa | 1.84e-16 | 4 |
bronchoalveolar duct junction | 4.45e-09 | 2 |
alveolar duct | 4.45e-09 | 2 |
bronchiole | 4.45e-09 | 2 |
respiratory tract epithelium | 5.42e-09 | 19 |
lung epithelium | 5.42e-09 | 19 |
lung | 1.25e-07 | 22 |
respiratory tube | 1.25e-07 | 22 |
respiration organ | 1.25e-07 | 22 |
pair of lungs | 1.25e-07 | 22 |
lung primordium | 1.25e-07 | 22 |
lung bud | 1.25e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.28e-51 | 106 |
cell type cancer | 1.55e-37 | 143 |
cancer | 1.35e-28 | 235 |
disease of cellular proliferation | 8.68e-28 | 239 |
squamous cell carcinoma | 1.51e-25 | 14 |
lung carcinoma | 8.62e-15 | 9 |
respiratory system cancer | 3.87e-14 | 16 |
non-small cell lung carcinoma | 1.03e-12 | 5 |
lung cancer | 1.16e-11 | 15 |
lung adenocarcinoma | 4.45e-09 | 2 |
bronchus cancer | 5.20e-09 | 7 |
bronchogenic carcinoma | 5.20e-09 | 7 |
pancreatic cancer | 5.76e-09 | 4 |
tubular adenocarcinoma | 8.64e-09 | 2 |
organ system cancer | 9.74e-09 | 137 |
pancreas adenocarcinoma | 4.07e-08 | 2 |
pancreatic carcinoma | 4.07e-08 | 2 |
pancreatic ductal adenocarcinoma | 4.07e-08 | 2 |