FFCP PHASE1:Hg19::chr2:193090813..193090814,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:193090813..193090814,+ | |||
|coexpression_cluster_id=C2512 | |||
|description=CAGE_peak_at_chr2:193090813..193090814,+ | |description=CAGE_peak_at_chr2:193090813..193090814,+ | ||
|id=chr2:193090813..193090814,+ | |id=chr2:193090813..193090814,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.44e-21!42;CL:0002009!1.20e-19!65;CL:0000860!1.68e-19!45;CL:0000557!1.43e-17!71;CL:0002194!2.98e-16!63;CL:0000576!2.98e-16!63;CL:0000040!2.98e-16!63;CL:0000559!2.98e-16!63;CL:0000839!3.40e-14!70;CL:0000766!9.82e-13!76;CL:0000763!1.23e-11!112;CL:0000049!1.23e-11!112;CL:0002031!4.73e-09!124;CL:0001014!9.44e-09!2;CL:0001016!9.44e-09!2;CL:0000738!2.56e-08!140;CL:0002087!1.41e-07!119;CL:0000453!3.12e-07!5;CL:0002032!4.58e-07!165;CL:0000837!4.58e-07!165 | |ontology_enrichment_celltype=CL:0002057!3.44e-21!42;CL:0002009!1.20e-19!65;CL:0000860!1.68e-19!45;CL:0000557!1.43e-17!71;CL:0002194!2.98e-16!63;CL:0000576!2.98e-16!63;CL:0000040!2.98e-16!63;CL:0000559!2.98e-16!63;CL:0000839!3.40e-14!70;CL:0000766!9.82e-13!76;CL:0000763!1.23e-11!112;CL:0000049!1.23e-11!112;CL:0002031!4.73e-09!124;CL:0001014!9.44e-09!2;CL:0001016!9.44e-09!2;CL:0000738!2.56e-08!140;CL:0002087!1.41e-07!119;CL:0000453!3.12e-07!5;CL:0002032!4.58e-07!165;CL:0000837!4.58e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0002539;3.79e-17;10!CL:0000235;5.26e-13;6!CL:0000815;2.85e-10;2!CL:0000792;2.85e-10;2!CL:0002677;2.85e-10;2!CL:0000898;2.88e-07;3!CL:0000307;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,3.79e-17,10;CL:0000235,5.76e-13,6;CL:0000815,2.72e-10,2;CL:0000792,2.72e-10,2;CL:0002677,2.72e-10,2;CL:0000898,2.79e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.88e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.83e-17!80;UBERON:0001474!2.69e-15!86;UBERON:0002193!4.90e-13!112;UBERON:0002405!1.50e-12!115;UBERON:0004765!2.92e-12!101;UBERON:0001434!2.92e-12!101;UBERON:0002390!4.31e-12!102;UBERON:0003061!4.31e-12!102;UBERON:0002204!9.22e-10!167 | |ontology_enrichment_uberon=UBERON:0002371!7.83e-17!80;UBERON:0001474!2.69e-15!86;UBERON:0002193!4.90e-13!112;UBERON:0002405!1.50e-12!115;UBERON:0004765!2.92e-12!101;UBERON:0001434!2.92e-12!101;UBERON:0002390!4.31e-12!102;UBERON:0003061!4.31e-12!102;UBERON:0002204!9.22e-10!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.79e-17;10!UBERON:0004695;3.79e-17;10!UBERON:0002111;3.79e-17;10!UBERON:0004178;3.79e-17;10!UBERON:0001135;1.18e-11;15!UBERON:0000947;1.71e-08;21!UBERON:0010191;1.71e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,3.79e-17,10;UBERON:0004695,3.79e-17,10;UBERON:0002111,3.79e-17,10;UBERON:0004178,3.79e-17,10;UBERON:0001135,1.18e-11,15;UBERON:0000947,1.71e-08,21;UBERON:0010191,1.71e-08,21 | |||
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| ||
|short_description=p@chr2:193090813..193090814,+ | |short_description=p@chr2:193090813..193090814,+ | ||
}} | }} |
Latest revision as of 04:32, 29 July 2015
Short description: | p@chr2:193090813..193090814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:193090813..193090814, + |
Coexpression cluster: | C2512_Aortic_CD14_Fibroblast_Smooth_extraskeletal_tridermal_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 3.79e-17 | 10 |
macrophage | 5.76e-13 | 6 |
regulatory T cell | 2.72e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.72e-10 | 2 |
naive regulatory T cell | 2.72e-10 | 2 |
naive T cell | 2.79e-07 | 3 |
duct epithelial cell | 3.16e-07 | 3 |
branched duct epithelial cell | 3.16e-07 | 3 |
tracheal epithelial cell | 3.16e-07 | 3 |
tracheoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 3.79e-17 | 10 |
arterial system smooth muscle | 3.79e-17 | 10 |
artery smooth muscle tissue | 3.79e-17 | 10 |
aorta smooth muscle tissue | 3.79e-17 | 10 |
smooth muscle tissue | 1.18e-11 | 15 |
aorta | 1.71e-08 | 21 |
aortic system | 1.71e-08 | 21 |