FFCP PHASE1:Hg19::chr2:216285416..216285421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216285416..216285421,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216285416..216285421,- | |description=CAGE_peak_at_chr2:216285416..216285421,- | ||
|id=chr2:216285416..216285421,- | |id=chr2:216285416..216285421,- | ||
|ontology_enrichment_celltype=CL:0000057!1.38e-25!75;CL:0000055!6.77e-22!180;CL:0002620!1.17e-14!23;CL:0000048!1.20e-14!430;CL:0002371!1.42e-14!591;CL:0000723!2.93e-14!436;CL:0000034!1.13e-13!444;CL:0002320!1.27e-12!365;CL:0000144!6.43e-12!625;CL:0000134!4.40e-11!358;CL:0000219!5.66e-10!390;CL:0000499!6.50e-10!27;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679;CL:0000012!4.33e-08!682 | |ontology_enrichment_celltype=CL:0000057!1.38e-25!75;CL:0000055!6.77e-22!180;CL:0002620!1.17e-14!23;CL:0000048!1.20e-14!430;CL:0002371!1.42e-14!591;CL:0000723!2.93e-14!436;CL:0000034!1.13e-13!444;CL:0002320!1.27e-12!365;CL:0000144!6.43e-12!625;CL:0000134!4.40e-11!358;CL:0000219!5.66e-10!390;CL:0000499!6.50e-10!27;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679;CL:0000012!4.33e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0002549;1.14e-07;2!CL:0002494;3.29e-07;16!CL:0000134;4.27e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.51e-13,76;CL:0002320,6.79e-09,361;CL:0000134,6.78e-08,354;CL:0002549,1.50e-07,2;CL:0002494,3.15e-07,16;CL:0000048,3.82e-07,427;CL:0000219,5.65e-07,386;CL:0000723,6.62e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.95e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.02e-14!375;UBERON:0002199!5.49e-12!45;UBERON:0002416!5.49e-12!45;UBERON:0002097!3.06e-10!40;UBERON:0000478!1.48e-07!24;UBERON:0003102!2.56e-07!95;UBERON:0005631!5.94e-07!14;UBERON:0000158!5.94e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.82e-09;10!UBERON:0000158;9.82e-09;10!UBERON:0005629;1.14e-07;2!UBERON:0005358;1.14e-07;2!UBERON:0001886;1.14e-07;2!UBERON:0004086;1.14e-07;2!UBERON:0005282;1.14e-07;2!UBERON:0005281;1.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.08e-11,371;UBERON:0005629,1.50e-07,2;UBERON:0005358,1.50e-07,2;UBERON:0001886,1.50e-07,2;UBERON:0004086,1.50e-07,2;UBERON:0005282,1.50e-07,2;UBERON:0005281,1.50e-07,2 | |||
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| ||
|short_description=p@chr2:216285416..216285421,- | |short_description=p@chr2:216285416..216285421,- | ||
}} | }} |
Latest revision as of 06:13, 29 July 2015
Short description: | p@chr2:216285416..216285421, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216285416..216285421, - |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.51e-13 | 76 |
connective tissue cell | 6.79e-09 | 361 |
mesenchymal cell | 6.78e-08 | 354 |
fibroblast of choroid plexus | 1.50e-07 | 2 |
cardiocyte | 3.15e-07 | 16 |
multi fate stem cell | 3.82e-07 | 427 |
motile cell | 5.65e-07 | 386 |
somatic stem cell | 6.62e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.08e-11 | 371 |
vascular plexus | 1.50e-07 | 2 |
ventricle of nervous system | 1.50e-07 | 2 |
choroid plexus | 1.50e-07 | 2 |
brain ventricle | 1.50e-07 | 2 |
ventricular system of brain | 1.50e-07 | 2 |
ventricular system of central nervous system | 1.50e-07 | 2 |