FFCP PHASE1:Hg19::chr2:217167996..217168032,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000452736_5end | |association_with_transcript=-15bp_to_ENST00000452736_5end | ||
|cluster_id=chr2:217167996..217168032,+ | |||
|description=CAGE_peak_1_at_ENST00000452736_5end | |description=CAGE_peak_1_at_ENST00000452736_5end | ||
|id=chr2:217167996..217168032,+ | |id=chr2:217167996..217168032,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.52e-10!180;CL:0000057!1.08e-08!75;CL:0002620!8.99e-08!23 | |ontology_enrichment_celltype=CL:0000055!7.52e-10!180;CL:0000057!1.08e-08!75;CL:0002620!8.99e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000511;3.58e-11;1!CL:0002625;3.58e-11;1!CL:0000216;3.58e-11;1!CL:0000222;1.15e-10;1!CL:0002581;1.15e-10;1!CL:0002616;1.15e-10;1 | |ontology_enrichment_celltype_v019=CL:0000511;3.58e-11;1!CL:0002625;3.58e-11;1!CL:0000216;3.58e-11;1!CL:0000222;1.15e-10;1!CL:0002581;1.15e-10;1!CL:0002616;1.15e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.76e-11,1;CL:0002625,3.76e-11,1;CL:0000216,3.76e-11,1;CL:0002616,7.46e-11,1;CL:0002581,9.97e-11,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.38e-15!14;DOID:17!1.21e-07!5;DOID:450!1.21e-07!5;DOID:66!1.21e-07!5;DOID:423!1.21e-07!5;DOID:0080000!1.21e-07!5;DOID:11722!1.21e-07!5;DOID:120!5.25e-07!27 | |ontology_enrichment_disease=DOID:2394!1.38e-15!14;DOID:17!1.21e-07!5;DOID:450!1.21e-07!5;DOID:66!1.21e-07!5;DOID:423!1.21e-07!5;DOID:0080000!1.21e-07!5;DOID:11722!1.21e-07!5;DOID:120!5.25e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.87e-11;14!DOID:3112;5.30e-11;1!DOID:3571;5.30e-11;1!DOID:2513;1.15e-10;1!DOID:4235;1.15e-10;1 | |ontology_enrichment_disease_v019=DOID:2394;2.87e-11;14!DOID:3112;5.30e-11;1!DOID:3571;5.30e-11;1!DOID:2513;1.15e-10;1!DOID:4235;1.15e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.87e-11,14;DOID:3112,4.58e-11,1;DOID:3571,6.14e-11,1;DOID:2513,9.05e-11,1;DOID:4235,1.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!9.94e-13!5;UBERON:0004532!9.94e-13!5;UBERON:0000992!1.93e-08!13 | |ontology_enrichment_uberon=UBERON:0002118!9.94e-13!5;UBERON:0004532!9.94e-13!5;UBERON:0000992!1.93e-08!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.40e-19;2!UBERON:0002118;5.42e-18;5!UBERON:0000992;4.04e-12;13!UBERON:0000991;2.00e-11;21!UBERON:0001136;3.58e-11;1!UBERON:0001343;3.58e-11;1!UBERON:0004910;3.58e-11;1!UBERON:0004813;3.58e-11;1!UBERON:0007195;5.30e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0005406;1.40e-19;2!UBERON:0002118;5.42e-18;5!UBERON:0000992;4.04e-12;13!UBERON:0000991;2.00e-11;21!UBERON:0001136;3.58e-11;1!UBERON:0001343;3.58e-11;1!UBERON:0004910;3.58e-11;1!UBERON:0004813;3.58e-11;1!UBERON:0007195;5.30e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,7.92e-20,2;UBERON:0002118,5.58e-18,5;UBERON:0000992,4.04e-12,13;UBERON:0000991,2.02e-11,21;UBERON:0009196,2.02e-11,21;UBERON:0009117,2.02e-11,21;UBERON:0005564,2.02e-11,21;UBERON:0001136,3.76e-11,1;UBERON:0001343,3.76e-11,1;UBERON:0004910,3.76e-11,1;UBERON:0005154,3.76e-11,1;UBERON:0005295,3.76e-11,1;UBERON:0004813,3.76e-11,1;UBERON:0005297,3.76e-11,1;UBERON:0005294,3.76e-11,1;UBERON:0010141,3.76e-11,1;UBERON:0005891,3.76e-11,1;UBERON:0007195,5.57e-11,1;UBERON:0004176,6.78e-11,22 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,0,0,1.74467704820074,0,0,0,0,0,0,0.791300934685361,0,0,2.01697543935533,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0.89694817844431,0.427114777637135,0.211931901159562,0,0.412210116953756,0.257640540045629,0,0,0.0974370051611986,0,0.368199594569197,0,0.355009592516614,0.806016785821122,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,4.5209479819428,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.512556597022804,0,0.482561763430822,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56473261525214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23015474029183,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0.813741466409323,4.00067050245631,0.214821114084977,1.39210127963548,3.98095888698616,1.60011105865261,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,2.45657876265145,0,0,0,0,0,0,0,0,0,0,0,0,10.9253808762594,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0.375935671919414,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,0,0,1.74467704820074,0,0,0,0,0,0,0.791300934685361,0,0,2.01697543935533,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0.89694817844431,0.427114777637135,0.211931901159562,0,0.412210116953756,0.257640540045629,0,0,0.0974370051611986,0,0.368199594569197,0,0.355009592516614,0.806016785821122,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,4.5209479819428,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.512556597022804,0,0.482561763430822,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56473261525214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23015474029183,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0.813741466409323,4.00067050245631,0.214821114084977,1.39210127963548,3.98095888698616,1.60011105865261,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,2.45657876265145,0,0,0,0,0,0,0,0,0,0,0,0,10.9253808762594,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0.375935671919414,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000452736 | |short_description=p1@ENST00000452736 | ||
}} | }} |
Latest revision as of 06:22, 29 July 2015
Short description: | p1@ENST00000452736 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000452736_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000452736_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.76e-11 | 1 |
seminiferous tubule epithelial cell | 3.76e-11 | 1 |
Sertoli cell | 3.76e-11 | 1 |
perirenal adipocyte cell | 7.46e-11 | 1 |
perirenal preadipocyte | 9.97e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 7.92e-20 | 2 |
right ovary | 5.58e-18 | 5 |
female gonad | 4.04e-12 | 13 |
gonad | 2.02e-11 | 21 |
indifferent external genitalia | 2.02e-11 | 21 |
indifferent gonad | 2.02e-11 | 21 |
gonad primordium | 2.02e-11 | 21 |
mesothelium | 3.76e-11 | 1 |
seminiferous tubule of testis | 3.76e-11 | 1 |
epithelium of male gonad | 3.76e-11 | 1 |
epithelial cord | 3.76e-11 | 1 |
sex cord | 3.76e-11 | 1 |
seminiferous tubule epithelium | 3.76e-11 | 1 |
testis sex cord | 3.76e-11 | 1 |
genital ridge | 3.76e-11 | 1 |
primitive sex cord of indifferent gonad | 3.76e-11 | 1 |
coelomic epithelium | 3.76e-11 | 1 |
stroma of bone marrow | 5.57e-11 | 1 |
external genitalia | 6.78e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.87e-11 | 14 |
papillary adenocarcinoma | 4.58e-11 | 1 |
liver cancer | 6.14e-11 | 1 |
basal cell carcinoma | 9.05e-11 | 1 |
spindle cell sarcoma | 1.46e-10 | 1 |