FFCP PHASE1:Hg19::chr2:218258495..218258507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:218258495..218258507,- | |||
|description=CAGE_peak_at_chr2:218258495..218258507,- | |description=CAGE_peak_at_chr2:218258495..218258507,- | ||
|id=chr2:218258495..218258507,- | |id=chr2:218258495..218258507,- | ||
|ontology_enrichment_celltype=CL:0000197!1.98e-08!6;CL:0000098!1.98e-08!6;CL:0002167!1.98e-08!6;CL:0002166!1.04e-07!3;CL:0002621!1.04e-07!3;CL:0000221!6.45e-07!71 | |ontology_enrichment_celltype=CL:0000197!1.98e-08!6;CL:0000098!1.98e-08!6;CL:0002167!1.98e-08!6;CL:0002166!1.04e-07!3;CL:0002621!1.04e-07!3;CL:0000221!6.45e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002166;3.15e-26;3!CL:0002621;3.15e-26;3!CL:0002174;1.30e-09;1!CL:0000228;1.30e-09;1!CL:0002372;1.30e-09;1!CL:0000501;1.30e-09;1!CL:0002537;1.02e-07;5!CL:0002251;5.78e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.90e-26,3;CL:0002621,1.90e-26,3;CL:0000228,8.91e-10,1;CL:0002372,8.91e-10,1;CL:0002174,1.06e-09,1;CL:0000501,1.06e-09,1;CL:0002537,1.32e-07,5;CL:0002251,5.14e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.59e-08!14 | |ontology_enrichment_disease=DOID:2394!2.59e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;9.33e-10;14!DOID:3571;1.30e-09;1!DOID:193;4.88e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.04e-09,14;DOID:3571,1.91e-09,1;DOID:193,5.02e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.04e-07!3;UBERON:0002118!7.18e-07!5;UBERON:0004532!7.18e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.15e-26;3!UBERON:0001708;7.79e-20;4!UBERON:0008895;7.79e-20;4!UBERON:0003929;1.35e-19;7!UBERON:0003350;3.53e-17;8!UBERON:0011159;5.46e-16;5!UBERON:0005383;5.56e-12;3!UBERON:0005382;5.56e-12;3!UBERON:0001828;3.40e-10;8!UBERON:0001874;1.30e-09;1!UBERON:0000369;3.29e-09;4!UBERON:0002435;3.29e-09;4!UBERON:0000204;3.29e-09;4!UBERON:0002118;1.10e-07;5!UBERON:0011137;1.53e-07;11!UBERON:0010323;1.53e-07;11!UBERON:0000344;5.78e-07;20!UBERON:0000486;5.98e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.90e-26,3;UBERON:0001708,5.34e-20,4;UBERON:0008895,5.34e-20,4;UBERON:0003350,2.59e-17,8;UBERON:0011159,4.04e-16,5;UBERON:0010188,1.58e-13,6;UBERON:0002539,1.58e-13,6;UBERON:0008816,1.58e-13,6;UBERON:0005383,6.96e-12,3;UBERON:0005382,6.96e-12,3;UBERON:0001828,2.82e-10,8;UBERON:0001874,1.36e-09,1;UBERON:0000369,3.89e-09,4;UBERON:0002435,3.89e-09,4;UBERON:0000204,3.89e-09,4;UBERON:0010082,3.89e-09,4;UBERON:0008814,1.05e-07,18;UBERON:0002118,1.15e-07,5;UBERON:0010323,1.34e-07,11;UBERON:0000344,5.14e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0.847727604638247,0,0,0,0,0,0.0974370051611986,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0,2.12586938479627,1.63647672354501,4.87567812161307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.445893486866185,2.81201501960331,4.03157107677263,1.55952606966625,0.268675568108545,0,0.766765358330422,0,0,0,0.144119953416961,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0.904902010304444,0,0,3.19125739901845,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,1.07057393278297,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,0,0,0.0920809889358963,0.574072240823034,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0,0.464845549297286,0.62962469366128,0,0,0,0,0.55597265731176,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0.35667105148125,0.709522128141196,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0,0,0,1.94310496754094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,1.72844298240254,0.653174720218818,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0.955780602982214,0,0.310525913752519,0,1.32920857278997,1.04349012362347,0,0,0,1.09109195521536,0.107410557042488,0.928067519756987,2.78667122089031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,1.09980912941201,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0.31037357147929,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0.847727604638247,0,0,0,0,0,0.0974370051611986,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0,2.12586938479627,1.63647672354501,4.87567812161307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.445893486866185,2.81201501960331,4.03157107677263,1.55952606966625,0.268675568108545,0,0.766765358330422,0,0,0,0.144119953416961,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0.904902010304444,0,0,3.19125739901845,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,1.07057393278297,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,0,0,0.0920809889358963,0.574072240823034,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0,0.464845549297286,0.62962469366128,0,0,0,0,0.55597265731176,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0.35667105148125,0.709522128141196,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0,0,0,1.94310496754094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,1.72844298240254,0.653174720218818,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0.955780602982214,0,0.310525913752519,0,1.32920857278997,1.04349012362347,0,0,0,1.09109195521536,0.107410557042488,0.928067519756987,2.78667122089031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,1.09980912941201,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0.31037357147929,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:218258495..218258507,- | |short_description=p@chr2:218258495..218258507,- | ||
}} | }} |
Latest revision as of 06:29, 29 July 2015
Short description: | p@chr2:218258495..218258507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:218258495..218258507, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.90e-26 | 3 |
gingival epithelial cell | 1.90e-26 | 3 |
multinucleate cell | 8.91e-10 | 1 |
myotube | 8.91e-10 | 1 |
follicular cell of ovary | 1.06e-09 | 1 |
granulosa cell | 1.06e-09 | 1 |
amnion mesenchymal stem cell | 1.32e-07 | 5 |
epithelial cell of alimentary canal | 5.14e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.90e-26 | 3 |
jaw skeleton | 5.34e-20 | 4 |
splanchnocranium | 5.34e-20 | 4 |
epithelium of mucosa | 2.59e-17 | 8 |
primary subdivision of cranial skeletal system | 4.04e-16 | 5 |
protuberance | 1.58e-13 | 6 |
pharyngeal arch | 1.58e-13 | 6 |
embryonic head | 1.58e-13 | 6 |
caudate-putamen | 6.96e-12 | 3 |
dorsal striatum | 6.96e-12 | 3 |
gingiva | 2.82e-10 | 8 |
putamen | 1.36e-09 | 1 |
corpus striatum | 3.89e-09 | 4 |
striatum | 3.89e-09 | 4 |
ventral part of telencephalon | 3.89e-09 | 4 |
future corpus striatum | 3.89e-09 | 4 |
pharyngeal arch system | 1.05e-07 | 18 |
right ovary | 1.15e-07 | 5 |
cranial skeletal system | 1.34e-07 | 11 |
mucosa | 5.14e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.04e-09 | 14 |
liver cancer | 1.91e-09 | 1 |
reproductive organ cancer | 5.02e-07 | 29 |