FFCP PHASE1:Hg19::chr2:220291179..220291201,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:220291179..220291201,+ | |||
|coexpression_cluster_id=C305 | |||
|description=CAGE_peak_at_chr2:220291179..220291201,+ | |description=CAGE_peak_at_chr2:220291179..220291201,+ | ||
|id=chr2:220291179..220291201,+ | |id=chr2:220291179..220291201,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.54e-13!9;CL:0000515!6.66e-09!4 | |ontology_enrichment_celltype=CL:0000188!1.54e-13!9;CL:0000515!6.66e-09!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;6.98e-13;65!UBERON:0005062;4.22e-10;4!UBERON:0007284;4.22e-10;4!UBERON:0007297;2.05e-09;2!UBERON:0003104;2.21e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.18e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.00e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.47e-30!115;UBERON:0003135!2.61e-09!11;UBERON:0004151!1.67e-08!3;UBERON:0003978!3.84e-08!3;UBERON:0009751!3.84e-08!3;UBERON:0000946!3.84e-08!3;UBERON:0002523!3.84e-08!3;UBERON:0005983!3.84e-08!3;UBERON:0002165!3.84e-08!3;UBERON:0002062!3.84e-08!3;UBERON:0007280!3.84e-08!3;UBERON:0006947!4.22e-08!3;UBERON:0004054!4.22e-08!3;UBERON:0002385!7.93e-07!63;UBERON:0001015!7.93e-07!63;UBERON:0000383!7.93e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.22e-14;3!UBERON:0003978;2.58e-13;3!UBERON:0000946;2.58e-13;3!UBERON:0006947;3.17e-13;3!UBERON:0004054;3.17e-13;3!UBERON:0007100;2.03e-12;25!UBERON:0005090;4.46e-10;2!UBERON:0001630;4.46e-10;2!UBERON:0005904;4.93e-10;4!UBERON:0002081;1.04e-09;2!UBERON:0000341;1.85e-09;2!UBERON:0002133;1.85e-09;2!UBERON:0004175;1.88e-08;21!UBERON:0005409;1.38e-07;22!UBERON:0000922;1.91e-07;49!UBERON:0000160;2.14e-07;17!UBERON:0001155;3.20e-07;9!UBERON:0001723;6.75e-07;3!UBERON:0001033;6.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.62e-22,114;UBERON:0004151,5.96e-14,3;UBERON:0003978,2.63e-13,3;UBERON:0009751,2.63e-13,3;UBERON:0000946,2.63e-13,3;UBERON:0002523,2.63e-13,3;UBERON:0005983,2.63e-13,3;UBERON:0002165,2.63e-13,3;UBERON:0002062,2.63e-13,3;UBERON:0007280,2.63e-13,3;UBERON:0006947,3.11e-13,3;UBERON:0004054,3.11e-13,3;UBERON:0007100,2.34e-11,27;UBERON:0005090,4.56e-10,2;UBERON:0001630,4.56e-10,2;UBERON:0005904,4.85e-10,4;UBERON:0002081,9.96e-10,2;UBERON:0010227,9.96e-10,2;UBERON:0002133,1.81e-09,2;UBERON:0000341,1.89e-09,2;UBERON:0003103,2.97e-09,68;UBERON:0000160,2.08e-07,17;UBERON:0001155,3.15e-07,9;UBERON:0004175,5.37e-07,25;UBERON:0001723,6.85e-07,3;UBERON:0001033,6.85e-07,3;UBERON:0010056,6.85e-07,3 | |||
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| ||
|short_description=p@chr2:220291179..220291201,+ | |short_description=p@chr2:220291179..220291201,+ | ||
}} | }} |
Latest revision as of 06:56, 29 July 2015
Short description: | p@chr2:220291179..220291201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:220291179..220291201, + |
Coexpression cluster: | C305_heart_skeletal_smooth_left_bladder_penis_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.62e-22 | 114 |
cardiac chamber | 5.96e-14 | 3 |
valve | 2.63e-13 | 3 |
cardiac mesenchyme | 2.63e-13 | 3 |
cardial valve | 2.63e-13 | 3 |
tunica intima | 2.63e-13 | 3 |
heart layer | 2.63e-13 | 3 |
endocardium | 2.63e-13 | 3 |
endocardial cushion | 2.63e-13 | 3 |
presumptive endocardium | 2.63e-13 | 3 |
male genital duct | 3.11e-13 | 3 |
internal male genitalia | 3.11e-13 | 3 |
primary circulatory organ | 2.34e-11 | 27 |
muscle structure | 4.56e-10 | 2 |
muscle organ | 4.56e-10 | 2 |
duct of male reproductive system | 4.85e-10 | 4 |
cardiac atrium | 9.96e-10 | 2 |
future cardiac atrium | 9.96e-10 | 2 |
atrioventricular valve | 1.81e-09 | 2 |
throat | 1.89e-09 | 2 |
compound organ | 2.97e-09 | 68 |
intestine | 2.08e-07 | 17 |
colon | 3.15e-07 | 9 |
internal genitalia | 5.37e-07 | 25 |
tongue | 6.85e-07 | 3 |
gustatory system | 6.85e-07 | 3 |
future tongue | 6.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.00e-10 | 2 |