FFCP PHASE1:Hg19::chr2:227050079..227050093,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:227050079..227050093,-
|short_description=p1@ENST00000423838
|description=CAGE_peak_1_at_ENST00000423838_5end
|association_with_transcript=0bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000423838_5end | |||
|cluster_id=chr2:227050079..227050093,- | |||
|description=CAGE_peak_1_at_ENST00000423838_5end | |||
|id=chr2:227050079..227050093,- | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-22!180;CL:0000680!1.84e-15!57;CL:0000056!1.84e-15!57;CL:0000355!1.84e-15!57;CL:0000187!7.80e-14!54;CL:0000393!3.19e-13!60;CL:0000211!3.19e-13!60;CL:0000192!3.73e-12!42;CL:0000514!3.73e-12!42;CL:0000183!9.79e-12!59;CL:0000548!8.63e-11!679;CL:0000004!8.63e-11!679;CL:0000255!8.63e-11!679;CL:0000012!1.65e-10!682;CL:0000057!2.90e-09!75;CL:0000220!4.39e-08!246;CL:0002321!7.43e-08!248;CL:0000003!7.79e-08!722;CL:0000144!2.04e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.28e-12;3!CL:0000128;3.46e-09;7!CL:0000126;3.46e-09;7!CL:0000127;3.46e-09;7!CL:0002195;2.79e-08;2!CL:0002571;2.79e-08;2!CL:0002600;2.79e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.78e-12,3;CL:0000128,3.56e-09,7;CL:0000126,3.56e-09,7;CL:0000127,3.56e-09,7;CL:0002453,3.56e-09,7;CL:0002600,2.60e-08,2;CL:0002195,2.81e-08,2;CL:0002571,2.81e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;2.79e-08;2!DOID:4905;2.79e-08;2!DOID:3498;2.79e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.16e-08,2;DOID:4905,2.16e-08,2;DOID:3498,2.16e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.33e-14!83;UBERON:0002329!1.33e-14!83;UBERON:0003077!1.33e-14!83;UBERON:0003059!1.33e-14!83;UBERON:0007282!1.33e-14!83;UBERON:0009618!1.33e-14!83;UBERON:0007285!1.33e-14!83;UBERON:0001134!1.18e-13!61;UBERON:0002036!1.18e-13!61;UBERON:0003082!1.18e-13!61;UBERON:0004290!7.40e-13!70;UBERON:0002385!7.58e-13!63;UBERON:0001015!7.58e-13!63;UBERON:0000383!7.58e-13!63;UBERON:0000486!2.76e-12!82;UBERON:0005256!1.56e-08!143;UBERON:0003104!5.50e-08!238;UBERON:0009142!5.50e-08!238;UBERON:0000475!1.78e-07!365;UBERON:0000490!1.83e-07!138;UBERON:0000481!2.19e-07!347;UBERON:0002204!9.36e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000423838 | |||
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Latest revision as of 07:18, 29 July 2015
Short description: | p1@ENST00000423838 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000423838_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423838_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.78e-12 | 3 |
oligodendrocyte | 3.56e-09 | 7 |
macroglial cell | 3.56e-09 | 7 |
astrocyte | 3.56e-09 | 7 |
oligodendrocyte precursor cell | 3.56e-09 | 7 |
smooth muscle cell of trachea | 2.60e-08 | 2 |
hepatic stem cell | 2.81e-08 | 2 |
hepatic mesenchymal stem cell | 2.81e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.16e-08 | 2 |
pancreatic carcinoma | 2.16e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.16e-08 | 2 |