FFCP PHASE1:Hg19::chr2:233285898..233285907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:233285898..233285907,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr2:233285898..233285907,- | |description=CAGE_peak_at_chr2:233285898..233285907,- | ||
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|ontology_enrichment_celltype=CL:0002322!4.18e-43!5;CL:0000039!4.39e-30!7;CL:0000586!4.39e-30!7;CL:0000148!2.64e-08!10;CL:0000541!2.64e-08!10 | |ontology_enrichment_celltype=CL:0002322!4.18e-43!5;CL:0000039!4.39e-30!7;CL:0000586!4.39e-30!7;CL:0000148!2.64e-08!10;CL:0000541!2.64e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.69e-109;5!CL:0002321;7.44e-37;15!CL:0000039;8.66e-29;7!CL:0000586;8.66e-29;7!CL:0000148;2.11e-20;10!CL:0000147;8.66e-15;14!CL:0000710;1.47e-10;20!CL:0000075;5.57e-08;27 | |ontology_enrichment_celltype_v019=CL:0002322;1.69e-109;5!CL:0002321;7.44e-37;15!CL:0000039;8.66e-29;7!CL:0000586;8.66e-29;7!CL:0000148;2.11e-20;10!CL:0000147;8.66e-15;14!CL:0000710;1.47e-10;20!CL:0000075;5.57e-08;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.51e-109,5;CL:0000039,8.26e-29,7;CL:0000586,8.26e-29,7;CL:0000148,2.04e-20,10;CL:0000541,2.04e-20,10;CL:0000147,8.46e-15,14;CL:0000710,1.45e-10,20;CL:0000075,5.50e-08,27 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.11e-20;10!UBERON:0005564;2.11e-20;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.11e-20;10!UBERON:0005564;2.11e-20;10 | ||
|ontology_enrichment_disease=DOID:3095!2.11e-13!22;DOID:2994!2.11e-13!22;DOID:178!9.70e-10!1;DOID:326!9.70e-10!1;DOID:3978!9.70e-10!1;DOID:3394!9.70e-10!1;DOID:5844!9.70e-10!1 | |ontology_enrichment_disease=DOID:3095!2.11e-13!22;DOID:2994!2.11e-13!22;DOID:178!9.70e-10!1;DOID:326!9.70e-10!1;DOID:3978!9.70e-10!1;DOID:3394!9.70e-10!1;DOID:5844!9.70e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.18e-09;22!DOID:2994;1.18e-09;22 | |ontology_enrichment_disease_v019=DOID:3095;1.18e-09;22!DOID:2994;1.18e-09;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.16e-09,22;DOID:2994,1.16e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.38e-17!8;UBERON:0003135!1.13e-12!11;UBERON:0004913!1.91e-09!1;UBERON:0003703!1.91e-09!1;UBERON:0001174!1.91e-09!1;UBERON:0004914!1.91e-09!1 | |ontology_enrichment_uberon=UBERON:0000473!2.38e-17!8;UBERON:0003135!1.13e-12!11;UBERON:0004913!1.91e-09!1;UBERON:0003703!1.91e-09!1;UBERON:0001174!1.91e-09!1;UBERON:0004914!1.91e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.68e-25;8!UBERON:0003135;1.28e-18;11!UBERON:0000922;1.09e-17;49!UBERON:0000991;4.37e-10;21!UBERON:0003101;1.18e-09;22!UBERON:0000079;1.18e-09;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.68e-25;8!UBERON:0003135;1.28e-18;11!UBERON:0000922;1.09e-17;49!UBERON:0000991;4.37e-10;21!UBERON:0003101;1.18e-09;22!UBERON:0000079;1.18e-09;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.58e-25,8;UBERON:0003135,1.24e-18,11;UBERON:0000991,4.30e-10,21;UBERON:0009196,4.30e-10,21;UBERON:0009117,4.30e-10,21;UBERON:0005564,4.30e-10,21;UBERON:0004176,1.16e-09,22;UBERON:0003101,1.16e-09,22;UBERON:0000079,1.16e-09,22 | |||
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|short_description=p@chr2:233285898..233285907,- | |short_description=p@chr2:233285898..233285907,- | ||
}} | }} |
Latest revision as of 07:46, 29 July 2015
Short description: | p@chr2:233285898..233285907, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:233285898..233285907, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.51e-109 | 5 |
germ line cell | 8.26e-29 | 7 |
germ cell | 8.26e-29 | 7 |
melanocyte | 2.04e-20 | 10 |
melanoblast | 2.04e-20 | 10 |
pigment cell | 8.46e-15 | 14 |
neurecto-epithelial cell | 1.45e-10 | 20 |
columnar/cuboidal epithelial cell | 5.50e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
testis | 2.58e-25 | 8 |
male reproductive organ | 1.24e-18 | 11 |
gonad | 4.30e-10 | 21 |
indifferent external genitalia | 4.30e-10 | 21 |
indifferent gonad | 4.30e-10 | 21 |
gonad primordium | 4.30e-10 | 21 |
external genitalia | 1.16e-09 | 22 |
male organism | 1.16e-09 | 22 |
male reproductive system | 1.16e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.16e-09 | 22 |
germ cell cancer | 1.16e-09 | 22 |