FFCP PHASE1:Hg19::chr2:241195467..241195480,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000457178_5end | |||
|cluster_id=chr2:241195467..241195480,- | |||
|description=CAGE_peak_1_at_ENST00000457178_5end | |||
|id=chr2:241195467..241195480,- | |||
|ontology_enrichment_celltype=CL:0000223!2.09e-19!59;CL:0000066!5.92e-19!254;CL:0002076!2.49e-17!43;CL:0002251!1.80e-10!21;CL:0002368!3.31e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.11e-14;42!CL:0002251;9.20e-12;20!CL:0002563;2.25e-10;4!CL:0002368;4.51e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.88e-18,58;CL:0002076,4.33e-17,42;CL:0002251,7.07e-12,20;CL:0002563,2.05e-10,4;CL:0002368,5.23e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.04e-11;1!UBERON:0003104;7.41e-08;31!CL:0000223;1.63e-07;58 | |||
|ontology_enrichment_disease=DOID:305!2.33e-18!106;DOID:0050687!5.78e-15!143;DOID:1749!4.52e-12!14;DOID:162!1.46e-07!235;DOID:14566!3.74e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.21e-11;14!DOID:1799;9.04e-11;1!DOID:10165;9.04e-11;1!DOID:1798;9.04e-11;1!DOID:3908;1.79e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.01e-11,14;DOID:1799,9.97e-11,1;DOID:10165,9.97e-11,1;DOID:1798,9.97e-11,1;DOID:3908,1.79e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.13e-16!169;UBERON:0000925!3.13e-16!169;UBERON:0006595!3.13e-16!169;UBERON:0001007!1.33e-12!155;UBERON:0001555!1.33e-12!155;UBERON:0007026!1.33e-12!155;UBERON:0000077!6.70e-12!130;UBERON:0001004!6.71e-10!72;UBERON:0004921!1.00e-09!129;UBERON:0004185!1.00e-09!129;UBERON:0000466!6.46e-09!126;UBERON:0000344!7.26e-09!12;UBERON:0005911!9.72e-09!82;UBERON:0001041!1.53e-07!98;UBERON:0003929!2.47e-07!54;UBERON:0005631!3.33e-07!14;UBERON:0000158!3.33e-07!14;UBERON:0000464!7.53e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;9.04e-11;1!UBERON:0006868;9.04e-11;1!UBERON:0003343;1.43e-10;4!UBERON:0004785;1.43e-10;4!UBERON:0001052;2.25e-10;4!UBERON:0001242;2.25e-10;4!UBERON:0001262;2.25e-10;4!UBERON:0004786;2.25e-10;4!UBERON:0004808;2.25e-10;4!UBERON:0001277;2.25e-10;4!UBERON:0004907;1.79e-08;5!UBERON:0000344;8.03e-08;20!UBERON:0000974;2.49e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.10e-10,1;UBERON:0006868,1.10e-10,1;UBERON:0003343,1.21e-10,4;UBERON:0004785,1.21e-10,4;UBERON:0001052,1.62e-10,4;UBERON:0001242,2.05e-10,4;UBERON:0001262,2.05e-10,4;UBERON:0004786,2.05e-10,4;UBERON:0004808,2.05e-10,4;UBERON:0001277,2.05e-10,4;UBERON:0004907,1.37e-08,5;UBERON:0004119,7.02e-08,160;UBERON:0000925,7.02e-08,160;UBERON:0006595,7.02e-08,160;UBERON:0000344,7.27e-08,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0.860413786167011,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0.552485933615378,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,1.14851441245126,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,1.42068073403207,0.23874448473769,0.593929361665277,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,4.0432885840795,0,0,3.4584585658209,0.538545866458633,1.4124158349861,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,1.97894300007517,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.391329237864179,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0.69647365264322,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.160317640503067,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,2.32991899054908,0.86661500537946,0.576911008668165,0.539228350833479,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.551639951094387,0.472091293214983,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0.665574309221114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0.617602894321944,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,2.94443155503077,1.41563668017288,0.366857197043358,0,0,0,0,0,0,0,1.30953347240711,0.327543835020193,0.443568258651136,0,0,0,0,0,0.548257766857182,0,0,1.78867398695433,0,0,0,0,0.532214220975833,0,0,0.0679697329768317,0,0.236387681767936,0,0.156986185701028,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,1.27016115057279,0.4582137370881,0,0,0.894843454382338,0.294450700845729,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0.459474497674225,0,0.0757786982182394,0,0,0,0.213233981900981,0.476128862927481,0,0.124149428591716,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0.244209805832924,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p1@ENST00000457178 | |||
}} |
Latest revision as of 08:26, 29 July 2015
Short description: | p1@ENST00000457178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000457178_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000457178_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.88e-18 | 58 |
endo-epithelial cell | 4.33e-17 | 42 |
epithelial cell of alimentary canal | 7.07e-12 | 20 |
intestinal epithelial cell | 2.05e-10 | 4 |
respiratory epithelial cell | 5.23e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.10e-10 | 1 |
seminal fluid secreting gland | 1.10e-10 | 1 |
mucosa of oral region | 1.21e-10 | 4 |
respiratory system mucosa | 1.21e-10 | 4 |
rectum | 1.62e-10 | 4 |
intestinal mucosa | 2.05e-10 | 4 |
wall of intestine | 2.05e-10 | 4 |
gastrointestinal system mucosa | 2.05e-10 | 4 |
gastrointestinal system epithelium | 2.05e-10 | 4 |
intestinal epithelium | 2.05e-10 | 4 |
lower digestive tract | 1.37e-08 | 5 |
endoderm-derived structure | 7.02e-08 | 160 |
endoderm | 7.02e-08 | 160 |
presumptive endoderm | 7.02e-08 | 160 |
mucosa | 7.27e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.01e-11 | 14 |
islet cell tumor | 9.97e-11 | 1 |
endocrine pancreas cancer | 9.97e-11 | 1 |
pancreatic endocrine carcinoma | 9.97e-11 | 1 |
non-small cell lung carcinoma | 1.79e-08 | 5 |