FFCP PHASE1:Hg19::chr2:242823508..242823531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000415434,ENST00000430555,ENST00000457686_5end | |association_with_transcript=0bp_to_ENST00000415434,ENST00000430555,ENST00000457686_5end | ||
|cluster_id=chr2:242823508..242823531,+ | |||
|coexpression_cluster_id=C1115 | |coexpression_cluster_id=C1115 | ||
|description=CAGE_peak_1_at_ENST00000415434_5end,CAGE_peak_1_at_ENST00000430555_5end,CAGE_peak_1_at_ENST00000457686_5end | |description=CAGE_peak_1_at_ENST00000415434_5end,CAGE_peak_1_at_ENST00000430555_5end,CAGE_peak_1_at_ENST00000457686_5end | ||
|id=chr2:242823508..242823531,+ | |id=chr2:242823508..242823531,+ | ||
|ontology_enrichment_celltype=CL:0000542!6.19e-23!53;CL:0000051!6.19e-23!53;CL:0000838!1.84e-22!52;CL:0000037!2.24e-17!172;CL:0000566!2.24e-17!172;CL:0000988!1.31e-16!182;CL:0000738!1.05e-14!140;CL:0002032!1.19e-14!165;CL:0000837!1.19e-14!165;CL:0002087!1.48e-12!119;CL:0000945!1.17e-11!24;CL:0000826!1.17e-11!24;CL:0002031!1.56e-11!124;CL:0000791!2.88e-11!18;CL:0000789!2.88e-11!18;CL:0002420!2.88e-11!18;CL:0002419!2.88e-11!18;CL:0000790!2.88e-11!18;CL:0000084!1.57e-10!25;CL:0000827!1.57e-10!25;CL:0000236!8.85e-10!14;CL:0000625!9.34e-08!11 | |ontology_enrichment_celltype=CL:0000542!6.19e-23!53;CL:0000051!6.19e-23!53;CL:0000838!1.84e-22!52;CL:0000037!2.24e-17!172;CL:0000566!2.24e-17!172;CL:0000988!1.31e-16!182;CL:0000738!1.05e-14!140;CL:0002032!1.19e-14!165;CL:0000837!1.19e-14!165;CL:0002087!1.48e-12!119;CL:0000945!1.17e-11!24;CL:0000826!1.17e-11!24;CL:0002031!1.56e-11!124;CL:0000791!2.88e-11!18;CL:0000789!2.88e-11!18;CL:0002420!2.88e-11!18;CL:0002419!2.88e-11!18;CL:0000790!2.88e-11!18;CL:0000084!1.57e-10!25;CL:0000827!1.57e-10!25;CL:0000236!8.85e-10!14;CL:0000625!9.34e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.72e-14;53!CL:0000945;2.84e-12;24!CL:0000791;5.05e-12;18!CL:0000789;5.05e-12;18!CL:0002419;5.05e-12;18!CL:0000084;3.16e-11;25!CL:0000236;4.20e-10;13!CL:0000625;2.95e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.47e-24,53;CL:0000051,2.47e-24,53;CL:0000838,7.92e-24,52;CL:0000037,2.61e-20,168;CL:0000988,1.88e-19,177;CL:0002032,3.00e-17,161;CL:0000837,3.00e-17,161;CL:0000738,4.46e-17,136;CL:0002087,1.66e-14,115;CL:0002031,1.21e-13,120;CL:0000945,2.49e-12,24;CL:0000826,2.49e-12,24;CL:0000791,6.50e-12,18;CL:0000789,6.50e-12,18;CL:0002420,6.50e-12,18;CL:0002419,6.50e-12,18;CL:0000790,6.50e-12,18;CL:0000084,4.23e-11,25;CL:0000827,4.23e-11,25;CL:0000236,2.50e-10,14;CL:0000625,3.60e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.72e-14;53!CL:0000790;5.05e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.28e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!4.28e-10!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.24e-10,114 | |||
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| ||
|short_description=p1@ENST00000415434,p1@ENST00000430555,p1@ENST00000457686 | |short_description=p1@ENST00000415434,p1@ENST00000430555,p1@ENST00000457686 | ||
}} | }} |
Latest revision as of 08:46, 29 July 2015
Short description: | p1@ENST00000415434, p1@ENST00000430555, p1@ENST00000457686 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000415434_5end, CAGE_peak_1_at_ENST00000430555_5end, CAGE_peak_1_at_ENST00000457686_5end |
Coexpression cluster: | C1115_CD4_CD34_CD8_CD19_Basophils_Peripheral_Dendritic |
Association with transcript: | 0bp_to_ENST00000415434, ENST00000430555, ENST00000457686_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.47e-24 | 53 |
common lymphoid progenitor | 2.47e-24 | 53 |
lymphoid lineage restricted progenitor cell | 7.92e-24 | 52 |
hematopoietic stem cell | 2.61e-20 | 168 |
hematopoietic cell | 1.88e-19 | 177 |
hematopoietic oligopotent progenitor cell | 3.00e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.00e-17 | 161 |
leukocyte | 4.46e-17 | 136 |
nongranular leukocyte | 1.66e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.21e-13 | 120 |
lymphocyte of B lineage | 2.49e-12 | 24 |
pro-B cell | 2.49e-12 | 24 |
mature alpha-beta T cell | 6.50e-12 | 18 |
alpha-beta T cell | 6.50e-12 | 18 |
immature T cell | 6.50e-12 | 18 |
mature T cell | 6.50e-12 | 18 |
immature alpha-beta T cell | 6.50e-12 | 18 |
T cell | 4.23e-11 | 25 |
pro-T cell | 4.23e-11 | 25 |
B cell | 2.50e-10 | 14 |
CD8-positive, alpha-beta T cell | 3.60e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.24e-10 | 114 |