FFCP PHASE1:Hg19::chr2:43266741..43266748,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENST00000449766_5end | |association_with_transcript=-55bp_to_ENST00000449766_5end | ||
|cluster_id=chr2:43266741..43266748,- | |||
|description=CAGE_peak_2_at_ENST00000449766_5end | |description=CAGE_peak_2_at_ENST00000449766_5end | ||
|id=chr2:43266741..43266748,- | |id=chr2:43266741..43266748,- | ||
|ontology_enrichment_celltype=CL:0002541!5.51e-13!3;CL:0002327!1.85e-10!4;CL:0000244!1.97e-10!4;CL:0000731!1.97e-10!4;CL:0002536!1.01e-09!2;CL:0000039!1.02e-09!7;CL:0000586!1.02e-09!7;CL:0000312!7.24e-08!5 | |ontology_enrichment_celltype=CL:0002541!5.51e-13!3;CL:0002327!1.85e-10!4;CL:0000244!1.97e-10!4;CL:0000731!1.97e-10!4;CL:0002536!1.01e-09!2;CL:0000039!1.02e-09!7;CL:0000586!1.02e-09!7;CL:0000312!7.24e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.31e-38;4!CL:0002327;6.31e-38;4!CL:0000731;6.31e-38;4!CL:0002536;1.38e-33;2!CL:0000349;2.20e-08;19!CL:0002541;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.93e-38,4;CL:0000244,7.63e-38,4;CL:0000731,7.63e-38,4;CL:0002536,6.00e-34,2;CL:0000349,2.09e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;1.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.20e-17!14;UBERON:0000158!1.20e-17!14;UBERON:0003124!2.09e-14!7;UBERON:0000476!5.51e-13!3;UBERON:0000920!5.51e-13!3;UBERON:0001911!1.85e-10!4;UBERON:0005333!1.85e-10!4;UBERON:0008425!1.85e-10!4;UBERON:0005311!1.85e-10!4;UBERON:0000478!9.98e-10!24;UBERON:0000365!2.02e-08!5;UBERON:0002298!1.05e-07!8;UBERON:0005910!4.50e-07!6 | |ontology_enrichment_uberon=UBERON:0005631!1.20e-17!14;UBERON:0000158!1.20e-17!14;UBERON:0003124!2.09e-14!7;UBERON:0000476!5.51e-13!3;UBERON:0000920!5.51e-13!3;UBERON:0001911!1.85e-10!4;UBERON:0005333!1.85e-10!4;UBERON:0008425!1.85e-10!4;UBERON:0005311!1.85e-10!4;UBERON:0000478!9.98e-10!24;UBERON:0000365!2.02e-08!5;UBERON:0002298!1.05e-07!8;UBERON:0005910!4.50e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.31e-38;4!UBERON:0000365;1.64e-30;5!UBERON:0005910;1.47e-25;6!UBERON:0004913;1.03e-17;1!UBERON:0003703;1.03e-17;1!UBERON:0001174;1.03e-17;1!UBERON:0004914;1.03e-17;1!UBERON:0005631;2.22e-15;10!UBERON:0000158;2.22e-15;10!UBERON:0000486;3.93e-13;12!UBERON:0000305;2.46e-10;7!UBERON:0003124;9.11e-07;3!UBERON:0000920;9.11e-07;3!UBERON:0002114;9.11e-07;2!UBERON:0000478;9.50e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.93e-38,4;UBERON:0005333,5.93e-38,4;UBERON:0008425,5.93e-38,4;UBERON:0005311,5.93e-38,4;UBERON:0000365,1.91e-30,5;UBERON:0005910,1.67e-25,6;UBERON:0000076,2.26e-19,8;UBERON:0004913,8.72e-18,1;UBERON:0003703,8.72e-18,1;UBERON:0001174,8.72e-18,1;UBERON:0004914,8.72e-18,1;UBERON:0005631,3.36e-11,14;UBERON:0000158,3.36e-11,14;UBERON:0000305,1.94e-10,7;UBERON:0004871,3.01e-09,8;UBERON:0002114,8.62e-07,2;UBERON:0000478,9.13e-07,24 | |||
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| ||
|short_description=p2@ENST00000449766 | |short_description=p2@ENST00000449766 | ||
}} | }} |
Latest revision as of 10:13, 29 July 2015
Short description: | p2@ENST00000449766 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000449766_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_ENST00000449766_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.93e-38 | 4 |
transitional epithelial cell | 7.63e-38 | 4 |
urothelial cell | 7.63e-38 | 4 |
amniotic epithelial cell | 6.00e-34 | 2 |
extraembryonic cell | 2.09e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.93e-38 | 4 |
mammary bud | 5.93e-38 | 4 |
mammary ridge | 5.93e-38 | 4 |
mammary placode | 5.93e-38 | 4 |
urothelium | 1.91e-30 | 5 |
transitional epithelium | 1.67e-25 | 6 |
external ectoderm | 2.26e-19 | 8 |
hepatopancreatic ampulla | 8.72e-18 | 1 |
extrahepatic bile duct | 8.72e-18 | 1 |
common bile duct | 8.72e-18 | 1 |
duodenal papilla | 8.72e-18 | 1 |
extraembryonic membrane | 3.36e-11 | 14 |
membranous layer | 3.36e-11 | 14 |
amnion | 1.94e-10 | 7 |
somatic layer of lateral plate mesoderm | 3.01e-09 | 8 |
duodenum | 8.62e-07 | 2 |
extraembryonic structure | 9.13e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.44e-09 | 2 |