FFCP PHASE1:Hg19::chr2:55184488..55184491,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:55184488..55184491,- | |||
|description=CAGE_peak_at_chr2:55184488..55184491,- | |description=CAGE_peak_at_chr2:55184488..55184491,- | ||
|id=chr2:55184488..55184491,- | |id=chr2:55184488..55184491,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002379;1.10e-13;1!CL:0001014;9.24e-08;2!CL:0001016;9.24e-08;2!CL:0002535;1.09e-07;2!CL:0000771;1.75e-07;2!CL:0000094;3.39e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.83e-13,1;CL:0001014,9.25e-08,2;CL:0001016,9.25e-08,2;CL:0002535,1.20e-07,2;CL:0000771,1.87e-07,2;CL:0000094,3.34e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.88e-25!239;DOID:162!8.64e-24!235;DOID:0050687!3.96e-19!143;DOID:305!2.82e-15!106;DOID:0050686!1.02e-13!137 | |ontology_enrichment_disease=DOID:14566!5.88e-25!239;DOID:162!8.64e-24!235;DOID:0050687!3.96e-19!143;DOID:305!2.82e-15!106;DOID:0050686!1.02e-13!137 | ||
|ontology_enrichment_disease_v019=DOID:3620;1.10e-13;1!DOID:3565;1.10e-13;1!DOID:3908;7.88e-11;5!DOID:154;1.09e-07;2!DOID:4236;1.09e-07;2!DOID:3910;1.75e-07;2!DOID:3307;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.83e-13,1;DOID:3565,1.83e-13,1;DOID:3908,6.15e-11,5;DOID:154,1.12e-07,2;DOID:4236,1.12e-07,2;DOID:3307,1.45e-07,2;DOID:3910,1.64e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.09e-07;2!UBERON:0004801;1.09e-07;2!UBERON:0004903;1.75e-07;2!UBERON:0002173;1.75e-07;2!UBERON:0002186;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.20e-07,2;UBERON:0004801,1.20e-07,2;UBERON:0004903,1.64e-07,2;UBERON:0002173,1.64e-07,2;UBERON:0002186,1.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0,0.232401601740905,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0.256686072559497,0,0,0.773288812777695,0,0,0,2.99161459204025,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0.144269212976445,0.853702120180969,0.159426272728822,0,0,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0.146508179271894,0,0.222886768554957,1.42068073403207,0,0,0,0,0,1.33570446027487,0.16480387422676,0.63337622438398,0.19924798825107,0,2.01546198283421,0.613612095012929,0,0.622079175323615,0.179736702294654,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,1.52581736317083,0,0,0,0.32681539055697,0.557694977114413,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.635746315921515,0.632994193584081,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0,1.19472429772959,0,0,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0,0,0,0.0969890164884194,0.706049013532002,0,0.685209623233754,0,0,0.586654148204409,0.561111741760736,0,0.19980960958213,0.288180834308212,0,0.857974989309823,0.288109595976299,1.86378803348149,0.235694034616795,0.543616824294456,0.418411385249333,0.407992870545287,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0.137539436597234,0.415440338029185,0.674921674654501,3.0952078182318,0,0,0,0.0524545881349981,0.739202355635845,0,1.72723677587501,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0.340776043570843,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0,0.553394539744923,0.249960815924213,0.151649117541648,0,1.17632909849086,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0,0,0.464033759878494,0.398095888698616,0.800055529326307,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,2.29326894192489,0.737318726261158,0,0,0,0.344429959321631,0,0,0,0,0.383683113910955,0.107824811396682,0.629063767423586,0.327628914576042,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.196295437002051,0,0.917142992608395,0.231051332300676,0.762764190934334,0,0.198916222116275,0,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0.556157009460346,0,0,0,0.913158720509496,1.29556554731173,0,0.0714765441766563,0,0.23248285073625,0,1.60342272946051,0.207216164163037,0,0,0,0.118332000730565,0.681707238073262,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0.118920090777569,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0.473314686579554,0,0,0,0,0,0,0.756998549010474,0,0.126698501011437,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.244209805832924,0.747091421144008,0,0.17965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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0,0.232401601740905,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0.256686072559497,0,0,0.773288812777695,0,0,0,2.99161459204025,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0.144269212976445,0.853702120180969,0.159426272728822,0,0,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0.146508179271894,0,0.222886768554957,1.42068073403207,0,0,0,0,0,1.33570446027487,0.16480387422676,0.63337622438398,0.19924798825107,0,2.01546198283421,0.613612095012929,0,0.622079175323615,0.179736702294654,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,1.52581736317083,0,0,0,0.32681539055697,0.557694977114413,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.635746315921515,0.632994193584081,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0,1.19472429772959,0,0,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0,0,0,0.0969890164884194,0.706049013532002,0,0.685209623233754,0,0,0.586654148204409,0.561111741760736,0,0.19980960958213,0.288180834308212,0,0.857974989309823,0.288109595976299,1.86378803348149,0.235694034616795,0.543616824294456,0.418411385249333,0.407992870545287,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0.137539436597234,0.415440338029185,0.674921674654501,3.0952078182318,0,0,0,0.0524545881349981,0.739202355635845,0,1.72723677587501,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0.340776043570843,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0,0.553394539744923,0.249960815924213,0.151649117541648,0,1.17632909849086,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0,0,0.464033759878494,0.398095888698616,0.800055529326307,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,2.29326894192489,0.737318726261158,0,0,0,0.344429959321631,0,0,0,0,0.383683113910955,0.107824811396682,0.629063767423586,0.327628914576042,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.196295437002051,0,0.917142992608395,0.231051332300676,0.762764190934334,0,0.198916222116275,0,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0.556157009460346,0,0,0,0.913158720509496,1.29556554731173,0,0.0714765441766563,0,0.23248285073625,0,1.60342272946051,0.207216164163037,0,0,0,0.118332000730565,0.681707238073262,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0.118920090777569,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0.473314686579554,0,0,0,0,0,0,0.756998549010474,0,0.126698501011437,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.244209805832924,0.747091421144008,0,0.17965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| ||
|short_description=p@chr2:55184488..55184491,- | |short_description=p@chr2:55184488..55184491,- | ||
}} | }} |
Latest revision as of 10:53, 29 July 2015
Short description: | p@chr2:55184488..55184491, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:55184488..55184491, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.83e-13 | 1 |
CD1a-positive Langerhans cell | 9.25e-08 | 2 |
immature CD1a-positive Langerhans cell | 9.25e-08 | 2 |
epithelial cell of cervix | 1.20e-07 | 2 |
eosinophil | 1.87e-07 | 2 |
granulocyte | 3.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.20e-07 | 2 |
cervix epithelium | 1.20e-07 | 2 |
bronchoalveolar duct junction | 1.64e-07 | 2 |
alveolar duct | 1.64e-07 | 2 |
bronchiole | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.83e-13 | 1 |
meningioma | 1.83e-13 | 1 |
non-small cell lung carcinoma | 6.15e-11 | 5 |
mixed cell type cancer | 1.12e-07 | 2 |
carcinosarcoma | 1.12e-07 | 2 |
teratoma | 1.45e-07 | 2 |
lung adenocarcinoma | 1.64e-07 | 2 |