FFCP PHASE1:Hg19::chr2:57892890..57892908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:57892890..57892908,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr2:57892890..57892908,+ | |description=CAGE_peak_at_chr2:57892890..57892908,+ | ||
|id=chr2:57892890..57892908,+ | |id=chr2:57892890..57892908,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.18e-26;2!UBERON:0004872;2.35e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.86e-32!7;UBERON:0002370!5.94e-26!4;UBERON:0005058!5.94e-26!4;UBERON:0009113!5.94e-26!4;UBERON:0003295!5.94e-26!4;UBERON:0005562!5.94e-26!4;UBERON:0000974!4.42e-23!10;UBERON:0003351!1.12e-17!6;UBERON:0000341!1.07e-13!2;UBERON:0003408!5.15e-11!10;UBERON:0001042!5.15e-11!10;UBERON:0009145!5.15e-11!10;UBERON:0006562!4.22e-10!11;UBERON:0009722!4.22e-10!11;UBERON:0007690!4.22e-10!11;UBERON:0002106!1.81e-09!3;UBERON:0004854!1.81e-09!3;UBERON:0009034!1.81e-09!3;UBERON:0002095!1.81e-09!3;UBERON:0004782!1.81e-09!3;UBERON:0003281!1.81e-09!3;UBERON:0009664!1.81e-09!3;UBERON:0002296!1.81e-09!3;UBERON:0005602!1.81e-09!3;UBERON:0001179!1.81e-09!3;UBERON:0006293!1.81e-09!3;UBERON:0005057!2.75e-09!26;UBERON:0008814!1.18e-07!15 | |ontology_enrichment_uberon=UBERON:0004177!1.86e-32!7;UBERON:0002370!5.94e-26!4;UBERON:0005058!5.94e-26!4;UBERON:0009113!5.94e-26!4;UBERON:0003295!5.94e-26!4;UBERON:0005562!5.94e-26!4;UBERON:0000974!4.42e-23!10;UBERON:0003351!1.12e-17!6;UBERON:0000341!1.07e-13!2;UBERON:0003408!5.15e-11!10;UBERON:0001042!5.15e-11!10;UBERON:0009145!5.15e-11!10;UBERON:0006562!4.22e-10!11;UBERON:0009722!4.22e-10!11;UBERON:0007690!4.22e-10!11;UBERON:0002106!1.81e-09!3;UBERON:0004854!1.81e-09!3;UBERON:0009034!1.81e-09!3;UBERON:0002095!1.81e-09!3;UBERON:0004782!1.81e-09!3;UBERON:0003281!1.81e-09!3;UBERON:0009664!1.81e-09!3;UBERON:0002296!1.81e-09!3;UBERON:0005602!1.81e-09!3;UBERON:0001179!1.81e-09!3;UBERON:0006293!1.81e-09!3;UBERON:0005057!2.75e-09!26;UBERON:0008814!1.18e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.38e-99;2!UBERON:0005058;9.38e-99;2!UBERON:0009113;9.38e-99;2!UBERON:0004177;2.22e-40;5!UBERON:0005057;2.22e-40;5!UBERON:0000077;2.06e-08;27!UBERON:0002405;2.06e-08;27!UBERON:0001638;8.85e-07;9!UBERON:0003920;8.85e-07;9!UBERON:0004582;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-50,4;UBERON:0005058,4.00e-50,4;UBERON:0009113,4.00e-50,4;UBERON:0003295,4.00e-50,4;UBERON:0005562,4.00e-50,4;UBERON:0003351,7.07e-34,6;UBERON:0004177,3.16e-29,7;UBERON:0005057,3.16e-29,7;UBERON:0000974,7.73e-21,10;UBERON:0003408,7.73e-21,10;UBERON:0001042,7.73e-21,10;UBERON:0009145,7.73e-21,10;UBERON:0006562,4.69e-19,11;UBERON:0009722,4.69e-19,11;UBERON:0007690,4.69e-19,11;UBERON:0008814,4.31e-12,18;UBERON:0001557,1.63e-11,19;UBERON:0004807,3.78e-08,28;UBERON:0000077,6.67e-08,29;UBERON:0001638,8.85e-07,9;UBERON:0003920,8.85e-07,9;UBERON:0004582,8.85e-07,9 | |||
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|short_description=p@chr2:57892890..57892908,+ | |short_description=p@chr2:57892890..57892908,+ | ||
}} | }} |
Latest revision as of 11:04, 29 July 2015
Short description: | p@chr2:57892890..57892908, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:57892890..57892908, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.00e-50 | 4 |
hemolymphoid system gland | 4.00e-50 | 4 |
thymic region | 4.00e-50 | 4 |
pharyngeal gland | 4.00e-50 | 4 |
thymus primordium | 4.00e-50 | 4 |
pharyngeal epithelium | 7.07e-34 | 6 |
hemopoietic organ | 3.16e-29 | 7 |
immune organ | 3.16e-29 | 7 |
neck | 7.73e-21 | 10 |
gland of gut | 7.73e-21 | 10 |
chordate pharynx | 7.73e-21 | 10 |
pharyngeal region of foregut | 7.73e-21 | 10 |
pharynx | 4.69e-19 | 11 |
entire pharyngeal arch endoderm | 4.69e-19 | 11 |
early pharyngeal endoderm | 4.69e-19 | 11 |
pharyngeal arch system | 4.31e-12 | 18 |
upper respiratory tract | 1.63e-11 | 19 |
respiratory system epithelium | 3.78e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.67e-08 | 29 |
vein | 8.85e-07 | 9 |
venous blood vessel | 8.85e-07 | 9 |
venous system | 8.85e-07 | 9 |