FFCP PHASE1:Hg19::chr2:74129486..74129511,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-144bp_to_AK129589_5end | |association_with_transcript=-144bp_to_AK129589_5end | ||
|cluster_id=chr2:74129486..74129511,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_3_at_AK129589_5end | |description=CAGE_peak_3_at_AK129589_5end | ||
|id=chr2:74129486..74129511,+ | |id=chr2:74129486..74129511,+ | ||
|ontology_enrichment_celltype=CL:0000192!2.20e-07!42;CL:0000514!2.20e-07!42;CL:0002594!2.49e-07!4 | |ontology_enrichment_celltype=CL:0000192!2.20e-07!42;CL:0000514!2.20e-07!42;CL:0002594!2.49e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002594;3.03e-17;4!CL:0002622;9.30e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,2.79e-17,4;CL:0002622,9.50e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.82e-10;2!UBERON:0006965;2.46e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.54e-10!115;UBERON:0000481!6.64e-09!347;UBERON:0005156!9.15e-08!59;UBERON:0000990!9.15e-08!59;UBERON:0001007!1.76e-07!155;UBERON:0001555!1.76e-07!155;UBERON:0007026!1.76e-07!155;UBERON:0001310!2.49e-07!4;UBERON:0004921!5.53e-07!129;UBERON:0004185!5.53e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.40e-18;17!UBERON:0005409;2.51e-17;22!UBERON:0001310;3.03e-17;4!UBERON:0004921;9.46e-15;33!UBERON:0006947;2.31e-14;3!UBERON:0004054;2.31e-14;3!UBERON:0003101;3.68e-14;22!UBERON:0000079;3.68e-14;22!UBERON:0003937;6.37e-12;12!UBERON:0005399;6.37e-12;12!UBERON:0005904;7.01e-11;4!UBERON:0000059;5.40e-10;11!UBERON:0004175;3.62e-09;21!UBERON:0002367;4.79e-09;11!UBERON:0010147;4.79e-09;11!UBERON:0002108;2.31e-08;4!UBERON:0001155;3.82e-08;9!UBERON:0005156;4.64e-08;59!UBERON:0000990;4.64e-08;59!UBERON:0010260;1.04e-07;9!UBERON:0001555;8.08e-07;54!UBERON:0003135;9.02e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.21e-18,17;UBERON:0001310,2.79e-17,4;UBERON:0001046,2.75e-16,19;UBERON:0005409,4.00e-15,25;UBERON:0006947,2.31e-14,3;UBERON:0004054,2.31e-14,3;UBERON:0003101,3.59e-14,22;UBERON:0000079,3.59e-14,22;UBERON:0000162,1.49e-13,14;UBERON:0001353,1.49e-13,14;UBERON:0000163,1.49e-13,14;UBERON:0006866,1.49e-13,14;UBERON:0000164,1.49e-13,14;UBERON:0000931,1.49e-13,14;UBERON:0003064,2.89e-13,28;UBERON:0005156,1.13e-12,59;UBERON:0000990,1.13e-12,59;UBERON:0004122,1.37e-12,15;UBERON:0003937,6.19e-12,12;UBERON:0005399,6.19e-12,12;UBERON:0005904,7.01e-11,4;UBERON:0004921,1.02e-10,118;UBERON:0007023,2.15e-10,114;UBERON:0000059,5.45e-10,11;UBERON:0001007,6.87e-10,145;UBERON:0001555,6.87e-10,145;UBERON:0007026,6.87e-10,145;UBERON:0002367,4.66e-09,11;UBERON:0010147,4.66e-09,11;UBERON:0009846,4.66e-09,11;UBERON:0003353,4.66e-09,11;UBERON:0004902,4.66e-09,11;UBERON:0003820,4.66e-09,11;UBERON:0009847,4.66e-09,11;UBERON:0004119,1.73e-08,160;UBERON:0000925,1.73e-08,160;UBERON:0006595,1.73e-08,160;UBERON:0002108,2.04e-08,4;UBERON:0001155,3.82e-08,9;UBERON:0010260,1.00e-07,9;UBERON:0000161,1.08e-07,36;UBERON:0004175,1.52e-07,25;UBERON:0003133,4.35e-07,48;UBERON:0003135,9.02e-07,11 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.74000264525148,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,2.22540236350701,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.921845842708516,0.0868836144680828,0.391602314925481,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14814448164607,2.1850940160806,2.75361271414791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0.929691098594572,0,0,0,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0,0.78494864019923,0.179872457583315,0,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,1.55545975149084,0,0,0,0,0,0,2.43492452355245,6.196469961995,2.53526042279017,0,0.0982490410131212,5.7067368237,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98495976502139,6.63081397274754,0,0.20453736500431,0,0.311039587661807,0,0,0,32.0591068320034,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,5.07871706125061,0,0,0,0.325942115766024,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8768102080411,4.0690479671536,29.9404771017476,0,0,0,0,0,0,0,0,0,20.5183889481683,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,10.1341467580377,0,0,0,0,17.9429680503576,0,1.58186518546373,0,0,0,0,0,6.40358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.916641696046735,0.717873024576814,0,0,0.223171457441873,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,1.42939065274673,0,0,0,2.5926644736038,0.653174720218818,0,0,0.340776043570843,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.828478110694391,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,1.5652351854352,0,0.380805212168795,0.406870733204662,2.36403256963327,0,0.464033759878494,4.77715066438339,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0.318004350653419,0,0,0.352675943690684,10.1061007526556,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0.548257766857182,21.3370806707397,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,3.61068227112365,0,0,8.21842848458546,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,27.5201582624104,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,2.62392137567012,5.90110813360685,0,47.5587744202577,0,0,0,0,0,0,0,0,0,0,0,8.76403665895821,2.2936464170227,0,0,0,0.436350690340377,19.5739930990698,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0,0,0,0.852935927603924,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0.0673520530145875,0.78894425931944,1.33064142618405,0,0,0,0,4.69281884806909,3.30051899293739,20.7517050941027,1.33151354837103,2.01273793591026,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.74000264525148,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,2.22540236350701,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.921845842708516,0.0868836144680828,0.391602314925481,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14814448164607,2.1850940160806,2.75361271414791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0.929691098594572,0,0,0,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0,0.78494864019923,0.179872457583315,0,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,1.55545975149084,0,0,0,0,0,0,2.43492452355245,6.196469961995,2.53526042279017,0,0.0982490410131212,5.7067368237,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98495976502139,6.63081397274754,0,0.20453736500431,0,0.311039587661807,0,0,0,32.0591068320034,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,5.07871706125061,0,0,0,0.325942115766024,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8768102080411,4.0690479671536,29.9404771017476,0,0,0,0,0,0,0,0,0,20.5183889481683,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,10.1341467580377,0,0,0,0,17.9429680503576,0,1.58186518546373,0,0,0,0,0,6.40358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.916641696046735,0.717873024576814,0,0,0.223171457441873,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,1.42939065274673,0,0,0,2.5926644736038,0.653174720218818,0,0,0.340776043570843,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.828478110694391,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,1.5652351854352,0,0.380805212168795,0.406870733204662,2.36403256963327,0,0.464033759878494,4.77715066438339,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0.318004350653419,0,0,0.352675943690684,10.1061007526556,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0.548257766857182,21.3370806707397,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,3.61068227112365,0,0,8.21842848458546,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,27.5201582624104,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,2.62392137567012,5.90110813360685,0,47.5587744202577,0,0,0,0,0,0,0,0,0,0,0,8.76403665895821,2.2936464170227,0,0,0,0.436350690340377,19.5739930990698,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0,0,0,0.852935927603924,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0.0673520530145875,0.78894425931944,1.33064142618405,0,0,0,0,4.69281884806909,3.30051899293739,20.7517050941027,1.33151354837103,2.01273793591026,0 | ||
|short_description=p3@AK129589 | |short_description=p3@AK129589 | ||
}} | }} |
Latest revision as of 12:12, 29 July 2015
Short description: | p3@AK129589 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK129589_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -144bp_to_AK129589_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 2.79e-17 | 4 |
prostate stromal cell | 9.50e-13 | 3 |