FFCP PHASE1:Hg19::chr3:113503216..113503233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:113503216..113503233,+ | |||
|description=CAGE_peak_at_chr3:113503216..113503233,+ | |description=CAGE_peak_at_chr3:113503216..113503233,+ | ||
|id=chr3:113503216..113503233,+ | |id=chr3:113503216..113503233,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002616;1.05e-12;1!CL:0000306;6.02e-12;4!CL:0002222;6.02e-12;4!CL:0002224;6.02e-12;4!CL:0000235;2.01e-08;6!CL:0002593;4.82e-07;2!CL:0000764;8.52e-07;2!CL:0000558;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.11e-12,1;CL:0000306,7.52e-12,4;CL:0002222,7.52e-12,4;CL:0002224,7.52e-12,4;CL:0000235,2.02e-08,6;CL:0002593,4.83e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;6.02e-12;4!UBERON:0005389;6.02e-12;4!UBERON:0000484;6.02e-12;4!UBERON:0000965;6.02e-12;4!UBERON:0001803;6.02e-12;4!UBERON:0000200;2.01e-08;6!UBERON:0002771;4.82e-07;2!UBERON:0002456;4.82e-07;2!UBERON:0005406;5.57e-07;2!UBERON:0002702;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.52e-12,4;UBERON:0005389,7.52e-12,4;UBERON:0000484,7.52e-12,4;UBERON:0002546,7.52e-12,4;UBERON:0000965,7.52e-12,4;UBERON:0001803,7.52e-12,4;UBERON:0003073,7.52e-12,4;UBERON:0005426,7.52e-12,4;UBERON:0000200,1.61e-08,6;UBERON:0002771,4.56e-07,2;UBERON:0002456,4.83e-07,2;UBERON:0005406,5.73e-07,2;UBERON:0002702,6.42e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.446961094427288,2.61701557230111,0,0,0,0.245733936501509,0,0.218441372130172,0,0.495065411840187,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0.273748850145768,0.376627918784408,0.458480434487708,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.447830948479849,0,0,0.436194716338694,0,0.485168122375632,0.232429036905685,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.941211697713023,0,0.674170453335254,0.612167784741805,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.422510572623884,0.212604299965044,0,0.22465726229299,0.300353785683013,0,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0,0.443458794925128,0.175669571386252,0.327447688744282,0,0,0.97364218096405,0,1.06366368415092,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0,0,0,0,0.74000264525148,0,0.808264032418128,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0,0.61417158655884,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0.340296549480063,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0.487894824518382,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.591534000199219,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0,0.433099343283221,0.462985512576611,0.761016608938393,0,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0.176096868026452,0,0,0,0.380987365753014,0,0,0,0.514137463516618,0.600686115687835,0.285826432630578,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,1.50677127429638,4.21667878966063,0,0,0,0.289562613335158,0.821905290201534,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0,0,0.184161977871793,0.114814448164607,0.728364672026868,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0.256450125116389,0,0,0.103041011647722,0.366277859273374,0.165018999841176,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0.435050081742686,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0.30347334256665,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0.78494864019923,0.539617372749944,0.274537029736055,0,0,1.58510321173008,0.842516912477962,0,0.243713489631284,4.22600587027022,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0.392996164052485,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,1.70894156152249,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0,0,0.557409525377156,0,0,0,0.199579371432817,0,0,0.649243880549111,0,0,0.47003968731907,0,0.338583555603207,0,0.403599414382095,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0.222617410045812,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0.511572370226872,0,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.583209226766509,0.173624994933292,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0.638002319463839,0,0,1.02193298195737,0,0.166211681900156,0.451191321234361,0.19606253431774,0.167821586975843,0.189753732724185,0,0.421996129056054,0.163232808159148,0.141353071433941,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0.468528891450678,0.547364367646998,0,0.242780379534093,0.789168805698781,0,0,0.12637315925697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| ||
|short_description=p@chr3:113503216..113503233,+ | |short_description=p@chr3:113503216..113503233,+ | ||
}} | }} |
Latest revision as of 14:28, 29 July 2015
Short description: | p@chr3:113503216..113503233, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:113503216..113503233, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.11e-12 | 1 |
crystallin accumulating cell | 7.52e-12 | 4 |
vertebrate lens cell | 7.52e-12 | 4 |
lens epithelial cell | 7.52e-12 | 4 |
macrophage | 2.02e-08 | 6 |
smooth muscle cell of the internal thoracic artery | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.52e-12 | 4 |
transparent eye structure | 7.52e-12 | 4 |
simple cuboidal epithelium | 7.52e-12 | 4 |
cranial placode | 7.52e-12 | 4 |
lens of camera-type eye | 7.52e-12 | 4 |
epithelium of lens | 7.52e-12 | 4 |
lens placode | 7.52e-12 | 4 |
lens vesicle | 7.52e-12 | 4 |
gyrus | 1.61e-08 | 6 |
middle temporal gyrus | 4.56e-07 | 2 |
internal thoracic artery | 4.83e-07 | 2 |
perirenal fat | 5.73e-07 | 2 |
middle frontal gyrus | 6.42e-07 | 2 |