FFCP PHASE1:Hg19::chr3:123333041..123333079,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:123333041..123333079,-
|short_description=p1@AL833897
|description=CAGE_peak_1_at_AL833897_5end
|association_with_transcript=-66bp_to_AL833897_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_AL833897_5end | |||
|cluster_id=chr3:123333041..123333079,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_AL833897_5end | |||
|id=chr3:123333041..123333079,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.11e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.07e-08,3;CL:0002581,9.79e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.11e-12;2!UBERON:0005754;2.95e-07;1!UBERON:0004874;3.13e-07;1!UBERON:0000358;5.72e-07;1!UBERON:0009143;5.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-17!115;UBERON:0000062!2.49e-08!511;UBERON:0005156!9.32e-07!59;UBERON:0000990!9.32e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.70e-18;3!UBERON:0004054;3.70e-18;3!UBERON:0000160;4.02e-14;17!UBERON:0005904;9.54e-14;4!UBERON:0005409;7.41e-11;22!UBERON:0004175;4.45e-09;21!UBERON:0004921;1.06e-08;33!UBERON:0003135;1.16e-08;11!UBERON:0000059;3.55e-08;11!UBERON:0000998;2.95e-07;1!UBERON:0006868;2.95e-07;1!UBERON:0000989;3.13e-07;1!UBERON:0008811;3.13e-07;1!UBERON:0001000;3.41e-07;1!UBERON:0005352;3.41e-07;1!UBERON:0005795;4.30e-07;1!UBERON:0001301;4.30e-07;1!UBERON:0006834;5.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.72e-18,3;UBERON:0004054,3.72e-18,3;UBERON:0000160,3.50e-14,17;UBERON:0005904,9.57e-14,4;UBERON:0005409,1.54e-09,25;UBERON:0003135,1.16e-08,11;UBERON:0000059,3.05e-08,11;UBERON:0003133,6.54e-08,48;UBERON:0005156,1.41e-07,59;UBERON:0000990,1.41e-07,59;UBERON:0004175,1.46e-07,25;UBERON:0000998,2.95e-07,1;UBERON:0006868,2.95e-07,1;UBERON:0000989,3.13e-07,1;UBERON:0008811,3.13e-07,1;UBERON:0006258,3.13e-07,1;UBERON:0005876,3.13e-07,1;UBERON:0004874,3.13e-07,1;UBERON:0001000,3.32e-07,1;UBERON:0005352,3.32e-07,1;UBERON:0001301,4.43e-07,1;UBERON:0006834,6.60e-07,1 | |||
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| ||
|short_description=p1@AL833897 | |||
}} | }} |
Latest revision as of 15:08, 29 July 2015
Short description: | p1@AL833897 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AL833897_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -66bp_to_AL833897_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.07e-08 | 3 |
perirenal preadipocyte | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.72e-18 | 3 |
internal male genitalia | 3.72e-18 | 3 |
intestine | 3.50e-14 | 17 |
duct of male reproductive system | 9.57e-14 | 4 |
gastrointestinal system | 1.54e-09 | 25 |
male reproductive organ | 1.16e-08 | 11 |
large intestine | 3.05e-08 | 11 |
reproductive organ | 6.54e-08 | 48 |
reproductive structure | 1.41e-07 | 59 |
reproductive system | 1.41e-07 | 59 |
internal genitalia | 1.46e-07 | 25 |
seminal vesicle | 2.95e-07 | 1 |
seminal fluid secreting gland | 2.95e-07 | 1 |
penis | 3.13e-07 | 1 |
intromittent organ | 3.13e-07 | 1 |
lateral plate mesenchyme | 3.13e-07 | 1 |
undifferentiated genital tubercle | 3.13e-07 | 1 |
somatopleure | 3.13e-07 | 1 |
vas deferens | 3.32e-07 | 1 |
spermatic cord | 3.32e-07 | 1 |
epididymis | 4.43e-07 | 1 |
uterus or analog | 6.60e-07 | 1 |