FFCP PHASE1:Hg19::chr3:124780248..124780265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:124780248..124780265,+ | |||
|description=CAGE_peak_at_chr3:124780248..124780265,+ | |||
|id=chr3:124780248..124780265,+ | |||
|ontology_enrichment_celltype=CL:0002579!2.80e-08!3;CL:0002622!3.52e-07!3;CL:0000192!4.14e-07!42;CL:0000514!4.14e-07!42;CL:0002504!8.75e-07!3;CL:1000279!8.75e-07!3;CL:1000280!8.75e-07!3;CL:0000187!9.81e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002195;4.37e-23;2!CL:0002571;4.37e-23;2!CL:0002579;9.79e-16;3!CL:0000511;2.91e-12;1!CL:0002625;2.91e-12;1!CL:0000216;2.91e-12;1!CL:1000306;4.08e-12;4!CL:0002547;4.08e-12;4!CL:0002554;6.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,6.12e-23,2;CL:0002571,6.12e-23,2;CL:0002579,1.22e-15,3;CL:0000511,1.75e-12,1;CL:0002625,1.75e-12,1;CL:0000216,1.75e-12,1;CL:1000306,3.45e-12,4;CL:0002547,3.45e-12,4;CL:0002554,6.07e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.66e-10!6;UBERON:0002358!3.66e-10!6;UBERON:0003684!3.66e-10!6;UBERON:0001178!3.66e-10!6;UBERON:0000490!2.10e-08!138;UBERON:0004923!6.48e-08!57;UBERON:0005256!3.75e-07!143;UBERON:0003929!3.82e-07!54;UBERON:0002100!5.09e-07!216;UBERON:0002367!6.12e-07!11;UBERON:0010147!6.12e-07!11;UBERON:0009846!6.12e-07!11;UBERON:0003353!6.12e-07!11;UBERON:0004902!6.12e-07!11;UBERON:0003820!6.12e-07!11;UBERON:0009847!6.12e-07!11;UBERON:0002385!6.49e-07!63;UBERON:0001015!6.49e-07!63;UBERON:0000383!6.49e-07!63;UBERON:0003101!6.83e-07!22;UBERON:0000079!6.83e-07!22;UBERON:0004457!8.13e-07!12;UBERON:0000042!8.13e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.91e-12;1!UBERON:0001343;2.91e-12;1!UBERON:0001282;2.91e-12;1!UBERON:0009842;2.91e-12;1!UBERON:0003704;2.91e-12;1!UBERON:0004910;2.91e-12;1!UBERON:0004813;2.91e-12;1!UBERON:0001171;2.91e-12;1!UBERON:0001172;2.91e-12;1!UBERON:0004797;4.08e-12;4!UBERON:0000415;4.08e-12;4!UBERON:0007240;4.08e-12;4!UBERON:0005742;4.08e-12;4!UBERON:0005734;4.08e-12;4!UBERON:0004664;4.08e-12;4!UBERON:0004663;4.08e-12;4!UBERON:0003688;2.52e-08;6!UBERON:0002358;2.52e-08;6!UBERON:0003684;2.52e-08;6!UBERON:0001178;2.52e-08;6!UBERON:0004909;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.75e-12,1;UBERON:0001343,1.75e-12,1;UBERON:0004910,1.75e-12,1;UBERON:0005154,1.75e-12,1;UBERON:0005295,1.75e-12,1;UBERON:0004813,1.75e-12,1;UBERON:0005297,1.75e-12,1;UBERON:0005294,1.75e-12,1;UBERON:0010141,1.75e-12,1;UBERON:0005891,1.75e-12,1;UBERON:0001282,2.46e-12,1;UBERON:0009842,2.46e-12,1;UBERON:0003704,2.46e-12,1;UBERON:0001171,2.46e-12,1;UBERON:0001172,2.46e-12,1;UBERON:0000415,3.45e-12,4;UBERON:0007240,3.45e-12,4;UBERON:0005742,3.45e-12,4;UBERON:0005734,3.45e-12,4;UBERON:0004664,3.45e-12,4;UBERON:0004663,3.45e-12,4;UBERON:0003688,2.81e-08,6;UBERON:0002358,2.81e-08,6;UBERON:0003684,2.81e-08,6;UBERON:0001178,2.81e-08,6;UBERON:0004923,1.43e-07,66;UBERON:0004797,2.45e-07,7;UBERON:0004909,7.20e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45228916977532,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,3.04541115870403,1.43418310374407,0,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,2.87447256726495,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,1.14382394926518,0,0,0,2.48774364119782,0,2.1100756394171,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0.280660094433074,2.94720043288112,1.02341449813341,0.482561763430822,0,0,0,0,0,0,4.59265908448164,0,0,0.34444334449382,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0.23056390438806,1.16684937732704,0.217294743844016,0,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.915360273587694,1.36107831386915,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45228916977532,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,3.04541115870403,1.43418310374407,0,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,2.87447256726495,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,1.14382394926518,0,0,0,2.48774364119782,0,2.1100756394171,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0.280660094433074,2.94720043288112,1.02341449813341,0.482561763430822,0,0,0,0,0,0,4.59265908448164,0,0,0.34444334449382,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0.23056390438806,1.16684937732704,0.217294743844016,0,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.915360273587694,1.36107831386915,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:124780248..124780265,+ | |||
}} | }} |
Latest revision as of 15:16, 29 July 2015
Short description: | p@chr3:124780248..124780265, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:124780248..124780265, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 6.12e-23 | 2 |
hepatic mesenchymal stem cell | 6.12e-23 | 2 |
omentum preadipocyte | 1.22e-15 | 3 |
androgen binding protein secreting cell | 1.75e-12 | 1 |
seminiferous tubule epithelial cell | 1.75e-12 | 1 |
Sertoli cell | 1.75e-12 | 1 |
fibroblast of tunica adventitia of artery | 3.45e-12 | 4 |
fibroblast of the aortic adventitia | 3.45e-12 | 4 |
fibroblast of lymphatic vessel | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.75e-12 | 1 |
seminiferous tubule of testis | 1.75e-12 | 1 |
epithelium of male gonad | 1.75e-12 | 1 |
epithelial cord | 1.75e-12 | 1 |
sex cord | 1.75e-12 | 1 |
seminiferous tubule epithelium | 1.75e-12 | 1 |
testis sex cord | 1.75e-12 | 1 |
genital ridge | 1.75e-12 | 1 |
primitive sex cord of indifferent gonad | 1.75e-12 | 1 |
coelomic epithelium | 1.75e-12 | 1 |
intralobular bile duct | 2.46e-12 | 1 |
acinus | 2.46e-12 | 1 |
intrahepatic bile duct | 2.46e-12 | 1 |
portal lobule | 2.46e-12 | 1 |
hepatic acinus | 2.46e-12 | 1 |
artery wall | 3.45e-12 | 4 |
tunica adventitia of artery | 3.45e-12 | 4 |
adventitia | 3.45e-12 | 4 |
tunica adventitia of blood vessel | 3.45e-12 | 4 |
aorta tunica adventitia | 3.45e-12 | 4 |
aorta wall | 3.45e-12 | 4 |
omentum | 2.81e-08 | 6 |
peritoneum | 2.81e-08 | 6 |
abdominal cavity | 2.81e-08 | 6 |
visceral peritoneum | 2.81e-08 | 6 |
organ component layer | 1.43e-07 | 66 |
blood vessel layer | 2.45e-07 | 7 |
epithelium of gonad | 7.20e-07 | 2 |