FFCP PHASE1:Hg19::chr3:127006887..127006889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:127006887..127006889,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr3:127006887..127006889,- | |||
|id=chr3:127006887..127006889,- | |||
|ontology_enrichment_celltype=CL:0002322!1.94e-11!5;CL:0000039!4.33e-11!7;CL:0000586!4.33e-11!7;CL:0000066!1.86e-07!254;CL:0000239!2.07e-07!3;CL:1000615!2.07e-07!3;CL:0002306!2.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.16e-09;7!CL:0000586;5.16e-09;7!CL:0002097;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.95e-09,7;CL:0000586,4.95e-09,7;CL:0002097,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.54e-23;10!UBERON:0005564;3.54e-23;10 | |||
|ontology_enrichment_disease=DOID:305!3.45e-12!106;DOID:0050687!1.63e-10!143;DOID:162!5.90e-10!235;DOID:14566!1.71e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3908;1.50e-12;5!DOID:3910;1.61e-08;2!DOID:3905;2.29e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,1.50e-12,5;DOID:3910,1.61e-08,2;DOID:3905,2.29e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.24e-10!8;UBERON:0003135!1.85e-07!11;UBERON:0006853!2.07e-07!3;UBERON:0007685!2.07e-07!3;UBERON:0004134!2.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.31e-29;8!UBERON:0003135;4.16e-21;11!UBERON:0000991;3.27e-11;21!UBERON:0003101;1.03e-10;22!UBERON:0000079;1.03e-10;22!UBERON:0004903;1.61e-08;2!UBERON:0002173;1.61e-08;2!UBERON:0002186;1.61e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.80e-29,8;UBERON:0003135,3.95e-21,11;UBERON:0000991,3.19e-11,21;UBERON:0009196,3.19e-11,21;UBERON:0009117,3.19e-11,21;UBERON:0005564,3.19e-11,21;UBERON:0004176,1.00e-10,22;UBERON:0003101,1.00e-10,22;UBERON:0000079,1.00e-10,22;UBERON:0004903,1.61e-08,2;UBERON:0002173,1.61e-08,2;UBERON:0002186,1.61e-08,2 | |||
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| ||
|short_description=p@chr3:127006887..127006889,- | |||
}} | }} |
Latest revision as of 15:24, 29 July 2015
Short description: | p@chr3:127006887..127006889, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:127006887..127006889, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.95e-09 | 7 |
germ cell | 4.95e-09 | 7 |
cortical cell of adrenal gland | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 6.80e-29 | 8 |
male reproductive organ | 3.95e-21 | 11 |
gonad | 3.19e-11 | 21 |
indifferent external genitalia | 3.19e-11 | 21 |
indifferent gonad | 3.19e-11 | 21 |
gonad primordium | 3.19e-11 | 21 |
external genitalia | 1.00e-10 | 22 |
male organism | 1.00e-10 | 22 |
male reproductive system | 1.00e-10 | 22 |
bronchoalveolar duct junction | 1.61e-08 | 2 |
alveolar duct | 1.61e-08 | 2 |
bronchiole | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.50e-12 | 5 |
lung adenocarcinoma | 1.61e-08 | 2 |
lung carcinoma | 2.29e-07 | 9 |