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FFCP PHASE1:Hg19::chr3:155273127..155273136,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=
|HGNC=
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-13bp_to_AK093601_5end
|association_with_transcript=-13bp_to_AK093601_5end
|cluster_id=chr3:155273127..155273136,-
|coexpression_cluster_id=C28
|description=CAGE_peak_4_at_AK093601_5end
|description=CAGE_peak_4_at_AK093601_5end
|id=chr3:155273127..155273136,-
|id=chr3:155273127..155273136,-
|ontology_enrichment_celltype=CL:0000819!4.06e-10!1;CL:0002127!6.91e-10!1;CL:0000914!6.91e-10!1;CL:0000911!6.91e-10!1;CL:0000814!6.91e-10!1;CL:0002042!6.91e-10!1;CL:0002039!6.91e-10!1;CL:0002040!6.91e-10!1;CL:0002041!6.91e-10!1
|ontology_enrichment_celltype=CL:0000819!4.06e-10!1;CL:0002127!6.91e-10!1;CL:0000914!6.91e-10!1;CL:0000911!6.91e-10!1;CL:0000814!6.91e-10!1;CL:0002042!6.91e-10!1;CL:0002039!6.91e-10!1;CL:0002040!6.91e-10!1;CL:0002041!6.91e-10!1
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:2531!9.66e-19!51;DOID:0060083!9.66e-19!51;DOID:74!3.77e-18!2;DOID:0060058!3.39e-14!10;DOID:0060073!4.06e-10!1;DOID:8675!4.06e-10!1;DOID:1240!4.07e-10!39;DOID:2355!4.44e-10!1;DOID:8552!4.85e-10!1;DOID:225!8.24e-10!1;DOID:1287!1.52e-09!4;DOID:0050686!5.07e-07!137;DOID:8692!6.74e-07!31
|ontology_enrichment_disease=DOID:2531!9.66e-19!51;DOID:0060083!9.66e-19!51;DOID:74!3.77e-18!2;DOID:0060058!3.39e-14!10;DOID:0060073!4.06e-10!1;DOID:8675!4.06e-10!1;DOID:1240!4.07e-10!39;DOID:2355!4.44e-10!1;DOID:8552!4.85e-10!1;DOID:225!8.24e-10!1;DOID:1287!1.52e-09!4;DOID:0050686!5.07e-07!137;DOID:8692!6.74e-07!31
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!1.15e-20!4;UBERON:0005058!1.15e-20!4;UBERON:0009113!1.15e-20!4;UBERON:0003295!1.15e-20!4;UBERON:0005562!1.15e-20!4;UBERON:0000974!1.82e-14!10;UBERON:0003351!5.62e-14!6;UBERON:0004177!4.66e-12!7;UBERON:0002581!6.33e-10!1;UBERON:0002902!1.17e-09!1;UBERON:0009899!1.17e-09!1;UBERON:0003408!1.37e-08!10;UBERON:0001042!1.37e-08!10;UBERON:0009145!1.37e-08!10;UBERON:0001872!7.01e-08!5;UBERON:0006562!7.50e-08!11;UBERON:0009722!7.50e-08!11;UBERON:0007690!7.50e-08!11;UBERON:0002021!1.02e-07!5;UBERON:0001950!9.83e-07!20
|ontology_enrichment_uberon=UBERON:0002370!1.15e-20!4;UBERON:0005058!1.15e-20!4;UBERON:0009113!1.15e-20!4;UBERON:0003295!1.15e-20!4;UBERON:0005562!1.15e-20!4;UBERON:0000974!1.82e-14!10;UBERON:0003351!5.62e-14!6;UBERON:0004177!4.66e-12!7;UBERON:0002581!6.33e-10!1;UBERON:0002902!1.17e-09!1;UBERON:0009899!1.17e-09!1;UBERON:0003408!1.37e-08!10;UBERON:0001042!1.37e-08!10;UBERON:0009145!1.37e-08!10;UBERON:0001872!7.01e-08!5;UBERON:0006562!7.50e-08!11;UBERON:0009722!7.50e-08!11;UBERON:0007690!7.50e-08!11;UBERON:0002021!1.02e-07!5;UBERON:0001950!9.83e-07!20
|ontology_enrichment_uberon_v019=UBERON:0002370;3.29e-195;2!UBERON:0005058;3.29e-195;2!UBERON:0009113;3.29e-195;2!UBERON:0004177;3.49e-79;5!UBERON:0005057;3.49e-79;5!UBERON:0000077;6.71e-16;27!UBERON:0002405;6.71e-16;27!UBERON:0002368;1.64e-10;33!UBERON:0002390;1.65e-10;32!UBERON:0000949;1.52e-08;43!UBERON:0002193;3.40e-07;42!UBERON:0002530;3.43e-07;57
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-98,4;UBERON:0005058,1.55e-98,4;UBERON:0009113,1.55e-98,4;UBERON:0003295,1.55e-98,4;UBERON:0005562,1.55e-98,4;UBERON:0003351,2.83e-66,6;UBERON:0004177,4.76e-57,7;UBERON:0005057,4.76e-57,7;UBERON:0000974,2.00e-40,10;UBERON:0003408,2.00e-40,10;UBERON:0001042,2.00e-40,10;UBERON:0009145,2.00e-40,10;UBERON:0006562,6.80e-37,11;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0001557,5.37e-22,19;UBERON:0004807,2.22e-15,28;UBERON:0000077,6.74e-15,29;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0000072,1.08e-09,47;UBERON:0003929,1.34e-08,54;UBERON:0000065,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.399158742865633,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,6.26512425409259,4.15900585782248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0
|short_description=p4@AK093601
|short_description=p4@AK093601
}}
}}

Latest revision as of 17:22, 29 July 2015

Short description:p4@AK093601
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_AK093601_5end
Coexpression cluster:C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic
Association with transcript: -13bp_to_AK093601_5end
EntrezGene:NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data