FFCP PHASE1:Hg19::chr3:185541195..185541206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10644 | |EntrezGene=entrezgene:10644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=28867 | |HGNC=HGNC:28867 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-136bp_to_ENST00000461957_5end | |association_with_transcript=-136bp_to_ENST00000461957_5end | ||
|cluster_id=chr3:185541195..185541206,- | |||
|description=CAGE_peak_13_at_IGF2BP2_5end | |description=CAGE_peak_13_at_IGF2BP2_5end | ||
|id=chr3:185541195..185541206,- | |id=chr3:185541195..185541206,- | ||
Revision as of 19:03, 29 July 2015
| Short description: | p13@IGF2BP2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_IGF2BP2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -136bp_to_ENST00000461957_5end |
| EntrezGene: | 10644 |
| HGNC: | 28867 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p13@IGF2BP2 |
|---|
0.0
1.0
2.0
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4.0
5.0
6.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 8.05e-37 | 7 |
| germ cell | 8.05e-37 | 7 |
| embryonic stem cell | 6.39e-07 | 5 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 2.44e-32 | 8 |
| male reproductive organ | 9.02e-24 | 11 |
| gonad | 7.73e-13 | 21 |
| indifferent external genitalia | 7.73e-13 | 21 |
| indifferent gonad | 7.73e-13 | 21 |
| gonad primordium | 7.73e-13 | 21 |
| external genitalia | 2.74e-12 | 22 |
| male organism | 2.74e-12 | 22 |
| male reproductive system | 2.74e-12 | 22 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| osteosarcoma | 1.33e-29 | 1 |
| germ cell and embryonal cancer | 2.74e-12 | 22 |
| germ cell cancer | 2.74e-12 | 22 |
Showing 1 to 3 of 3 entries
