FFCP PHASE1:Hg19::chr3:186262166..186262170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1427 | |EntrezGene=entrezgene:1427 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2417 | |HGNC=HGNC:2417 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P22914 | |UniProt=uniprot:P22914 | ||
|association_with_transcript=0bp_to_NM_017541,uc003fqe.2_5end | |association_with_transcript=0bp_to_NM_017541,uc003fqe.2_5end | ||
|cluster_id=chr3:186262166..186262170,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_1_at_CRYGS_5end | |description=CAGE_peak_1_at_CRYGS_5end | ||
Revision as of 19:05, 29 July 2015
| Short description: | p1@CRYGS |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CRYGS_5end |
| Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
| Association with transcript: | 0bp_to_NM_017541, uc003fqe.2_5end |
| EntrezGene: | 1427 |
| HGNC: | 2417 |
| UniProt: | P22914 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CRYGS |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| crystallin accumulating cell | 1.92e-41 | 4 |
| vertebrate lens cell | 1.92e-41 | 4 |
| lens epithelial cell | 1.92e-41 | 4 |
| mucus secreting cell | 3.91e-19 | 1 |
| chondroblast | 4.52e-13 | 6 |
| chondrocyte | 4.52e-13 | 6 |
| columnar/cuboidal epithelial cell | 4.14e-11 | 27 |
| seromucus secreting cell | 2.99e-10 | 2 |
| mesenchymal stem cell of adipose | 7.94e-10 | 8 |
| GAG secreting cell | 5.00e-09 | 9 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| cuboidal epithelium | 1.92e-41 | 4 |
| transparent eye structure | 1.92e-41 | 4 |
| simple cuboidal epithelium | 1.92e-41 | 4 |
| cranial placode | 1.92e-41 | 4 |
| lens of camera-type eye | 1.92e-41 | 4 |
| epithelium of lens | 1.92e-41 | 4 |
| lens placode | 1.92e-41 | 4 |
| lens vesicle | 1.92e-41 | 4 |
| external ectoderm | 3.92e-21 | 8 |
| pigment epithelium of eye | 1.45e-15 | 11 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| mucinous adenocarcinoma | 3.91e-19 | 1 |
Showing 1 to 1 of 1 entries
