FFCP PHASE1:Hg19::chr3:72361610..72361627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:72361610..72361627,- | |||
|coexpression_cluster_id=C4343 | |||
|description=CAGE_peak_at_chr3:72361610..72361627,- | |||
|id=chr3:72361610..72361627,- | |||
|ontology_enrichment_celltype=CL:0000988!4.06e-23!182;CL:0000037!4.92e-20!172;CL:0000566!4.92e-20!172;CL:0002032!3.14e-18!165;CL:0000837!3.14e-18!165;CL:0000763!1.83e-13!112;CL:0000049!1.83e-13!112;CL:0000080!7.03e-12!6;CL:0002087!1.17e-09!119;CL:0002057!2.78e-08!42;CL:0002320!2.95e-08!365;CL:0002031!4.66e-08!124;CL:0000134!7.74e-08!358;CL:0000860!1.31e-07!45;CL:0000738!1.44e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.56e-19;1!CL:0000911;1.56e-19;1!CL:0000814;1.56e-19;1!CL:0000346;2.55e-07;3!CL:1000428;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.56e-19,1;CL:0000914,1.56e-19,1;CL:0000911,1.56e-19,1;CL:0000814,1.56e-19,1;CL:0002042,1.56e-19,1;CL:0002039,1.56e-19,1;CL:0002040,1.56e-19,1;CL:0002041,1.56e-19,1;CL:0002032,1.70e-10,161;CL:0000837,1.70e-10,161;CL:0000893,1.89e-10,2;CL:0002489,1.89e-10,2;CL:0000809,1.89e-10,2;CL:0000808,1.89e-10,2;CL:0000894,1.89e-10,2;CL:0000806,1.89e-10,2;CL:0000807,1.89e-10,2;CL:0000805,1.89e-10,2;CL:0002425,1.89e-10,2;CL:0000037,4.96e-10,168;CL:0000988,1.74e-09,177;CL:0000763,8.12e-08,108;CL:0000049,8.12e-08,108;CL:0000346,2.47e-07,3;CL:1000428,2.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002425;1.89e-10;2 | |||
|ontology_enrichment_disease=DOID:1240!1.85e-19!39;DOID:2531!8.67e-19!51;DOID:0060083!8.67e-19!51;DOID:8692!2.84e-18!31;DOID:74!1.05e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.55e-29;39!DOID:8692;6.50e-27;31!DOID:2531;4.81e-22;51!DOID:0060083;4.81e-22;51!DOID:630;4.69e-19;1!DOID:0050177;4.69e-19;1!DOID:0050427;4.69e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.00e-37,39;DOID:8692,2.97e-28,31;DOID:2531,4.49e-28,51;DOID:0060083,4.49e-28,51;DOID:630,4.69e-19,1;DOID:0050177,4.69e-19,1;DOID:0050427,4.69e-19,1;DOID:0050686,4.90e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.98e-08!375;UBERON:0002390!4.35e-07!102;UBERON:0003061!4.35e-07!102;UBERON:0002193!4.44e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.55e-07;3!UBERON:0001992;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.47e-07,3;UBERON:0001992,2.47e-07,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0.575384784644301,0.512321413058201,0,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14404764057442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26800176769578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,4.0216127727797,0.211673582723883,0.649243880549111,11.7934814807653,0,0,0,5.92521222305612,0.321176150207399,0,0,5.15258017133647,0,0,0,1.75849285861836,2.22724939116194,0,0,0,0,0,0,0,1.33732061132974,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69203256335621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.617819694732514,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p@chr3:72361610..72361627,- | |||
}} | }} |
Latest revision as of 23:33, 29 July 2015
Short description: | p@chr3:72361610..72361627, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:72361610..72361627, - |
Coexpression cluster: | C4343_acute_chronic_NK_Hair_xeroderma_adult_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.56e-19 | 1 |
immature NK T cell | 1.56e-19 | 1 |
effector T cell | 1.56e-19 | 1 |
mature NK T cell | 1.56e-19 | 1 |
immature NK T cell stage IV | 1.56e-19 | 1 |
immature NK T cell stage I | 1.56e-19 | 1 |
immature NK T cell stage II | 1.56e-19 | 1 |
immature NK T cell stage III | 1.56e-19 | 1 |
hematopoietic oligopotent progenitor cell | 1.70e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-10 | 161 |
thymocyte | 1.89e-10 | 2 |
double negative thymocyte | 1.89e-10 | 2 |
double-positive, alpha-beta thymocyte | 1.89e-10 | 2 |
DN4 thymocyte | 1.89e-10 | 2 |
DN1 thymic pro-T cell | 1.89e-10 | 2 |
DN2 thymocyte | 1.89e-10 | 2 |
DN3 thymocyte | 1.89e-10 | 2 |
immature single positive thymocyte | 1.89e-10 | 2 |
early T lineage precursor | 1.89e-10 | 2 |
hematopoietic stem cell | 4.96e-10 | 168 |
hematopoietic cell | 1.74e-09 | 177 |
myeloid cell | 8.12e-08 | 108 |
common myeloid progenitor | 8.12e-08 | 108 |
hair follicle dermal papilla cell | 2.47e-07 | 3 |
stem cell of epidermis | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.47e-07 | 3 |
papillary layer of dermis | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.00e-37 | 39 |
myeloid leukemia | 2.97e-28 | 31 |
hematologic cancer | 4.49e-28 | 51 |
immune system cancer | 4.49e-28 | 51 |
genetic disease | 4.69e-19 | 1 |
monogenic disease | 4.69e-19 | 1 |
xeroderma pigmentosum | 4.69e-19 | 1 |
organ system cancer | 4.90e-10 | 137 |