FFCP PHASE1:Hg19::chr3:72361646..72361664,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:72361646..72361664,- | |||
|coexpression_cluster_id=C4343 | |||
|description=CAGE_peak_at_chr3:72361646..72361664,- | |description=CAGE_peak_at_chr3:72361646..72361664,- | ||
|id=chr3:72361646..72361664,- | |id=chr3:72361646..72361664,- | ||
|ontology_enrichment_celltype=CL:0000037!7.43e-17!172;CL:0000566!7.43e-17!172;CL:0000988!8.34e-17!182;CL:0002032!1.73e-16!165;CL:0000837!1.73e-16!165;CL:0000763!1.47e-10!112;CL:0000049!1.47e-10!112;CL:0000134!1.42e-07!358;CL:0002320!2.81e-07!365 | |ontology_enrichment_celltype=CL:0000037!7.43e-17!172;CL:0000566!7.43e-17!172;CL:0000988!8.34e-17!182;CL:0002032!1.73e-16!165;CL:0000837!1.73e-16!165;CL:0000763!1.47e-10!112;CL:0000049!1.47e-10!112;CL:0000134!1.42e-07!358;CL:0002320!2.81e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000346;7.92e-07;3!CL:1000428;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.25e-11,108;CL:0000049,1.25e-11,108;CL:0002032,1.70e-11,161;CL:0000837,1.70e-11,161;CL:0000037,5.56e-11,168;CL:0000988,2.23e-10,177;CL:0000346,7.28e-07,3;CL:1000428,7.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.62e-28!39;DOID:2531!1.90e-26!51;DOID:0060083!1.90e-26!51;DOID:8692!8.43e-25!31;DOID:74!3.38e-09!2;DOID:0050686!7.38e-09!137 | |ontology_enrichment_disease=DOID:1240!1.62e-28!39;DOID:2531!1.90e-26!51;DOID:0060083!1.90e-26!51;DOID:8692!8.43e-25!31;DOID:74!3.38e-09!2;DOID:0050686!7.38e-09!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.38e-40;31!DOID:1240;1.35e-29;39!DOID:2531;2.80e-18;51!DOID:0060083;2.80e-18;51!DOID:630;6.78e-18;1!DOID:0050177;6.78e-18;1!DOID:0050427;6.78e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.05e-42,31;DOID:1240,1.27e-33,39;DOID:2531,1.37e-25,51;DOID:0060083,1.37e-25,51;DOID:630,7.37e-18,1;DOID:0050177,7.37e-18,1;DOID:0050427,7.37e-18,1;DOID:0050686,5.01e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.60e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!1.60e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.92e-07;3!UBERON:0001992;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,7.28e-07,3;UBERON:0001992,7.28e-07,3 | |||
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|short_description=p@chr3:72361646..72361664,- | |short_description=p@chr3:72361646..72361664,- | ||
}} | }} |
Latest revision as of 23:33, 29 July 2015
Short description: | p@chr3:72361646..72361664, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:72361646..72361664, - |
Coexpression cluster: | C4343_acute_chronic_NK_Hair_xeroderma_adult_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.25e-11 | 108 |
common myeloid progenitor | 1.25e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.70e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-11 | 161 |
hematopoietic stem cell | 5.56e-11 | 168 |
hematopoietic cell | 2.23e-10 | 177 |
hair follicle dermal papilla cell | 7.28e-07 | 3 |
stem cell of epidermis | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 7.28e-07 | 3 |
papillary layer of dermis | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.05e-42 | 31 |
leukemia | 1.27e-33 | 39 |
hematologic cancer | 1.37e-25 | 51 |
immune system cancer | 1.37e-25 | 51 |
genetic disease | 7.37e-18 | 1 |
monogenic disease | 7.37e-18 | 1 |
xeroderma pigmentosum | 7.37e-18 | 1 |
organ system cancer | 5.01e-09 | 137 |