FFCP PHASE1:Hg19::chr4:169635119..169635122,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:169635119..169635122,+ | |||
|description=CAGE_peak_at_chr4:169635119..169635122,+ | |||
|id=chr4:169635119..169635122,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.31e-07!7;CL:0000126!2.31e-07!7;CL:0000127!2.31e-07!7;CL:0002453!2.31e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.18e-16;3!CL:0000067;2.18e-16;3!CL:0005012;2.18e-16;3!CL:0002304;2.18e-16;3!CL:0002605;3.59e-15;3!CL:0000128;2.00e-11;7!CL:0000126;2.00e-11;7!CL:0000127;2.00e-11;7!CL:0002590;4.74e-08;3!CL:0000515;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.87e-16,3;CL:0000067,1.87e-16,3;CL:0005012,1.87e-16,3;CL:0002304,1.87e-16,3;CL:0002605,2.10e-15,3;CL:0000128,1.33e-11,7;CL:0000126,1.33e-11,7;CL:0000127,1.33e-11,7;CL:0002453,1.33e-11,7;CL:0002590,4.75e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.03e-20;4!UBERON:0007284;7.03e-20;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.18e-16;3!UBERON:0001775;2.18e-16;3!UBERON:0003978;3.59e-15;3!UBERON:0000946;3.59e-15;3!UBERON:0000488;2.06e-12;4!UBERON:0006876;8.37e-12;11!UBERON:0000341;8.21e-11;2!UBERON:0002133;8.21e-11;2!UBERON:0002081;1.89e-10;2!UBERON:0002203;2.04e-08;6!UBERON:0001768;2.04e-08;6!UBERON:0002200;2.04e-08;6!UBERON:0010313;5.04e-08;10!UBERON:0004151;3.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.87e-16,3;UBERON:0001775,1.87e-16,3;UBERON:0003978,2.20e-15,3;UBERON:0009751,2.20e-15,3;UBERON:0000946,2.20e-15,3;UBERON:0002523,2.20e-15,3;UBERON:0005983,2.20e-15,3;UBERON:0002165,2.20e-15,3;UBERON:0002062,2.20e-15,3;UBERON:0007280,2.20e-15,3;UBERON:0000488,1.84e-12,4;UBERON:0006876,7.85e-12,11;UBERON:0002133,7.83e-11,2;UBERON:0000341,1.64e-10,2;UBERON:0002081,1.81e-10,2;UBERON:0010227,1.81e-10,2;UBERON:0002203,1.90e-08,6;UBERON:0001768,1.90e-08,6;UBERON:0002200,1.90e-08,6;UBERON:0010313,4.69e-08,10;UBERON:0002342,4.69e-08,10;UBERON:0005062,4.69e-08,10;UBERON:0004151,2.94e-07,3;UBERON:0004121,7.23e-07,171;UBERON:0000924,7.23e-07,171;UBERON:0006601,7.23e-07,171;UBERON:0004797,7.45e-07,7 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,0.218441372130172,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,2.57612388417951,1.77936752594749,1.50651167513763,0,0,0,0,0,0,0,0,0,0.774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,5.95569348133627,2.66075276955077,5.44575671297381,0.327447688744282,0,0,0,0.348259474598534,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.926864265692532,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0.276149695926898,0.161646056818812,0,0,0,0,1.63647672354501,0,0,0,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0.290633938513962,0,0,0,0.829312462163088,0.576479813667846,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,2.89562613335158,0.821905290201534,3.22309733831812,0,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.630809660135739,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76231551918512,0.561320188866147,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0.601519410909855,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,2.01452822600355,5.69315549452057,0,0,0,0,0,0.307007349452259,0.551346289938122,0.537101224341368,0.145016693914229,0.596586391912706,0.623224249527161,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0.429374660225974,6.32669227911434,3.79655309662471,0.571890581771475,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.640276590135727,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,2.76125442755818,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0.341380344856499,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.980446171670911,0,2.15460723810632,0,0.46112780877612,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0.995261931078505,0.265372693510018,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0,1.20990716048664,0,0.126373159256976,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0.483781656445426,0.146178634172371,0.574808199372465,0,0,0.225980740780532,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0.471388069233591,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,2.51354161145029,1.83328339209347,1.43574604915363,0.599037001496973,1.28767814440971,0.223171457441873,2.35142153703542,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.524545881349981,0,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.310525913752519,0,0,2.60872530905867,0,0,0,0.363697318405119,0.214821114084977,0,0.796191777397232,2.80019435264208,0.343395705182793,0.673498977531838,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0.109209638192014,0,0,0,0,0.636008701306837,0,0,2.1160556621441,0,0.0642292250964595,1.41696576325585,0,0,0,0,0,0,0,0,0.183428598521679,0,0.762764190934334,0,1.79024599904647,0,0.60511520611056,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0.992422356778588,0,0.383287282918786,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0.118193840883968,0.333694205676207,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0.23248285073625,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,2.3196288626764,1.45713297917742,0,0,0,0,0,0.603851374266694,0.154348316215889,0.874238242015829,0,0,0,0.196308467114945,0,0.4226557275834,0.339854229375634,0,0.193373663920732,0,0,0,0.160482733378337,0,1.37618785021362,0,0.788857810965923,0,1.30905207102113,0,0,0,0.432626562123789,0,0.109265571963696,1.26698501011437,0,0,0,0,0,0,0,0.103432995861895,1.0661699095049,2.14257988317366,0,0.558672428662721,0.112131862580613,0.25458863311266,0.808468755832877,0.435433495793923,0.684466602170562,0,0.0717222053926763,0.665320713092027,0.732629417498771,0,0,0,0,2.44482888365733,6.51033885305182,0,0,0 | |||
|short_description=p@chr4:169635119..169635122,+ | |||
}} |
Latest revision as of 03:13, 30 July 2015
Short description: | p@chr4:169635119..169635122, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:169635119..169635122, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.87e-16 | 3 |
ciliated epithelial cell | 1.87e-16 | 3 |
multi-ciliated epithelial cell | 1.87e-16 | 3 |
non-pigmented ciliary epithelial cell | 1.87e-16 | 3 |
astrocyte of the cerebral cortex | 2.10e-15 | 3 |
oligodendrocyte | 1.33e-11 | 7 |
macroglial cell | 1.33e-11 | 7 |
astrocyte | 1.33e-11 | 7 |
oligodendrocyte precursor cell | 1.33e-11 | 7 |
smooth muscle cell of the brain vasculature | 4.75e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.87e-16 | 3 |
ciliary body | 1.87e-16 | 3 |
valve | 2.20e-15 | 3 |
cardiac mesenchyme | 2.20e-15 | 3 |
cardial valve | 2.20e-15 | 3 |
tunica intima | 2.20e-15 | 3 |
heart layer | 2.20e-15 | 3 |
endocardium | 2.20e-15 | 3 |
endocardial cushion | 2.20e-15 | 3 |
presumptive endocardium | 2.20e-15 | 3 |
atypical epithelium | 1.84e-12 | 4 |
vasculature of organ | 7.85e-12 | 11 |
atrioventricular valve | 7.83e-11 | 2 |
throat | 1.64e-10 | 2 |
cardiac atrium | 1.81e-10 | 2 |
future cardiac atrium | 1.81e-10 | 2 |
vasculature of eye | 1.90e-08 | 6 |
uvea | 1.90e-08 | 6 |
vasculature of head | 1.90e-08 | 6 |
neural crest-derived structure | 4.69e-08 | 10 |
neural crest | 4.69e-08 | 10 |
neural fold | 4.69e-08 | 10 |
cardiac chamber | 2.94e-07 | 3 |
ectoderm-derived structure | 7.23e-07 | 171 |
ectoderm | 7.23e-07 | 171 |
presumptive ectoderm | 7.23e-07 | 171 |
blood vessel layer | 7.45e-07 | 7 |