FFCP PHASE1:Hg19::chr4:183399811..183399829,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:183399811..183399829,+ | |||
|description=CAGE_peak_at_chr4:183399811..183399829,+ | |||
|id=chr4:183399811..183399829,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.76e-34!24;CL:0000115!4.31e-24!35;CL:0000071!1.47e-22!18;CL:0002546!1.47e-22!18;CL:0002078!7.43e-18!44;CL:1000413!5.32e-16!9;CL:0005020!5.16e-14!6;CL:0002138!5.16e-14!6;CL:0005022!5.16e-14!6;CL:0000213!2.16e-12!57;CL:0000215!2.16e-12!57;CL:0002544!5.75e-10!6;CL:0002144!3.11e-08!3;CL:0000222!2.70e-07!119;CL:0002618!4.44e-07!3;CL:0002541!6.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.95e-54;24!CL:0000115;4.64e-36;36!CL:0002144;7.99e-34;3!CL:0002138;4.91e-30;6!CL:0000071;1.27e-29;18!CL:0002078;1.27e-24;45!CL:0002545;3.30e-23;2!CL:0002575;7.23e-23;2!CL:1000413;4.00e-20;9!CL:0002544;2.18e-17;6!CL:0000213;2.74e-15;58!CL:0000215;2.74e-15;58!CL:0000669;6.20e-12;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.00e-54,24;CL:0000115,1.37e-42,36;CL:0002144,8.46e-34,3;CL:0002078,9.02e-34,45;CL:0005020,5.49e-30,6;CL:0002138,5.49e-30,6;CL:0005022,5.49e-30,6;CL:0000071,1.22e-29,18;CL:0002546,1.22e-29,18;CL:0000213,7.45e-26,58;CL:0000215,7.45e-26,58;CL:0002545,2.79e-23,2;CL:0002575,4.89e-23,2;CL:1000413,3.72e-20,9;CL:0002544,2.13e-17,6;CL:0000669,5.10e-12,4;CL:0000222,1.57e-11,121;CL:0000076,4.97e-08,63 | |||
|ontology_enrichment_development_v019=CL:0005022;4.91e-30;6!CL:0002546;1.27e-29;18!CL:0000222;4.23e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;4.56e-07;2!DOID:4236;4.56e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,4.56e-07,2;DOID:4236,4.56e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.47e-22!18;UBERON:0004638!1.47e-22!18;UBERON:0004852!1.47e-22!18;UBERON:0000487!1.00e-17!22;UBERON:0003915!5.32e-16!9;UBERON:0004700!5.32e-16!9;UBERON:0001917!5.32e-16!9;UBERON:0006914!3.99e-15!25;UBERON:0000055!6.20e-14!69;UBERON:0002049!2.01e-12!79;UBERON:0007798!2.01e-12!79;UBERON:0004111!6.24e-12!241;UBERON:0000477!1.11e-11!286;UBERON:0000349!6.00e-11!5;UBERON:0002465!9.15e-11!10;UBERON:0001473!2.85e-10!8;UBERON:0004536!2.85e-10!8;UBERON:0006558!2.85e-10!8;UBERON:0004535!2.77e-09!110;UBERON:0000025!7.43e-09!194;UBERON:0001009!7.70e-09!113;UBERON:0001981!9.61e-09!60;UBERON:0007500!9.61e-09!60;UBERON:0004537!9.61e-09!60;UBERON:0006965!9.61e-09!60;UBERON:0001915!3.11e-08!3;UBERON:0001982!3.11e-08!3;UBERON:0007023!6.46e-08!115;UBERON:0004872!4.42e-07!84;UBERON:0000476!6.21e-07!3;UBERON:0000920!6.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;7.99e-34;3!UBERON:0001915;7.99e-34;3!UBERON:0001982;7.99e-34;3!UBERON:0004638;1.27e-29;18!UBERON:0001986;1.27e-29;18!UBERON:0004852;1.27e-29;18!UBERON:0000487;3.82e-24;22!UBERON:0005800;3.30e-23;2!UBERON:0001515;3.30e-23;2!UBERON:0001473;1.27e-22;8!UBERON:0004536;1.27e-22;8!UBERON:0006558;1.27e-22;8!UBERON:0006914;3.50e-21;25!UBERON:0003915;4.00e-20;9!UBERON:0004700;4.00e-20;9!UBERON:0001917;4.00e-20;9!UBERON:0002465;3.66e-18;10!UBERON:0000490;2.66e-15;33!UBERON:0000055;1.06e-13;65!UBERON:0002049;2.41e-10;75!UBERON:0007798;2.41e-10;75!UBERON:0002405;7.40e-07;27!UBERON:0001954;9.81e-07;2!UBERON:0003022;9.81e-07;2!UBERON:0002421;9.81e-07;2!UBERON:0002600;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,8.46e-34,3;UBERON:0001915,8.46e-34,3;UBERON:0001982,8.46e-34,3;UBERON:0004638,1.22e-29,18;UBERON:0001986,1.22e-29,18;UBERON:0004852,1.22e-29,18;UBERON:0000487,3.69e-24,22;UBERON:0005800,2.79e-23,2;UBERON:0001515,2.79e-23,2;UBERON:0001473,1.38e-22,8;UBERON:0004536,1.38e-22,8;UBERON:0006558,1.38e-22,8;UBERON:0006914,3.40e-21,25;UBERON:0003915,3.72e-20,9;UBERON:0004700,3.72e-20,9;UBERON:0001917,3.72e-20,9;UBERON:0000055,2.61e-18,68;UBERON:0002465,3.91e-18,10;UBERON:0002049,8.99e-16,78;UBERON:0007798,8.99e-16,78;UBERON:0004535,7.47e-11,109;UBERON:0001009,1.61e-10,112;UBERON:0007500,1.28e-08,59;UBERON:0001981,1.28e-08,59;UBERON:0004537,1.28e-08,59;UBERON:0006965,1.28e-08,59;UBERON:0001954,9.54e-07,2;UBERON:0003022,9.54e-07,2;UBERON:0002421,9.54e-07,2;UBERON:0002600,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,4.30117297553062,0.347140501607594,0,3.77549492588915,0.825354125820202,0.417989933073621,0.258416759169329,0.35576626268671,6.02497102976406,3.62546385398232,4.56163263431108,1.46437234528902,1.83831540172934,5.67099363517232,0.357198913136319,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61972632835436,1.38895653772983,3.04406643575357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95801157462741,2.40200396667599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02056223165909,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46587478213157,0,0,0,0.884634079449797,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,1.91107787795487,0,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0.186224142887574,0,0.190941474834495,1.21270313374932,0,0.684466602170562,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p@chr4:183399811..183399829,+ | |||
}} |
Latest revision as of 03:44, 30 July 2015
Short description: | p@chr4:183399811..183399829, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:183399811..183399829, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.00e-54 | 24 |
endothelial cell | 1.37e-42 | 36 |
capillary endothelial cell | 8.46e-34 | 3 |
meso-epithelial cell | 9.02e-34 | 45 |
lymphangioblast | 5.49e-30 | 6 |
endothelial cell of lymphatic vessel | 5.49e-30 | 6 |
vascular lymphangioblast | 5.49e-30 | 6 |
blood vessel endothelial cell | 1.22e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.22e-29 | 18 |
lining cell | 7.45e-26 | 58 |
barrier cell | 7.45e-26 | 58 |
thoracic aorta endothelial cell | 2.79e-23 | 2 |
central nervous system pericyte | 4.89e-23 | 2 |
endothelial cell of artery | 3.72e-20 | 9 |
aortic endothelial cell | 2.13e-17 | 6 |
pericyte cell | 5.10e-12 | 4 |
mesodermal cell | 1.57e-11 | 121 |
squamous epithelial cell | 4.97e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 8.46e-34 | 3 |
endothelium of capillary | 8.46e-34 | 3 |
capillary | 8.46e-34 | 3 |
blood vessel endothelium | 1.22e-29 | 18 |
endothelium | 1.22e-29 | 18 |
cardiovascular system endothelium | 1.22e-29 | 18 |
simple squamous epithelium | 3.69e-24 | 22 |
segment of aorta | 2.79e-23 | 2 |
thoracic aorta | 2.79e-23 | 2 |
lymphatic vessel | 1.38e-22 | 8 |
lymph vasculature | 1.38e-22 | 8 |
lymphatic part of lymphoid system | 1.38e-22 | 8 |
squamous epithelium | 3.40e-21 | 25 |
endothelial tube | 3.72e-20 | 9 |
arterial system endothelium | 3.72e-20 | 9 |
endothelium of artery | 3.72e-20 | 9 |
vessel | 2.61e-18 | 68 |
lymphoid system | 3.91e-18 | 10 |
vasculature | 8.99e-16 | 78 |
vascular system | 8.99e-16 | 78 |
cardiovascular system | 7.47e-11 | 109 |
circulatory system | 1.61e-10 | 112 |
epithelial tube open at both ends | 1.28e-08 | 59 |
blood vessel | 1.28e-08 | 59 |
blood vasculature | 1.28e-08 | 59 |
vascular cord | 1.28e-08 | 59 |
Ammon's horn | 9.54e-07 | 2 |
lobe parts of cerebral cortex | 9.54e-07 | 2 |
hippocampal formation | 9.54e-07 | 2 |
limbic lobe | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 4.56e-07 | 2 |
carcinosarcoma | 4.56e-07 | 2 |