FFCP PHASE1:Hg19::chr4:38057520..38057536,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:38057520..38057536,- | |||
|coexpression_cluster_id=C514 | |||
|description=CAGE_peak_at_chr4:38057520..38057536,- | |description=CAGE_peak_at_chr4:38057520..38057536,- | ||
|id=chr4:38057520..38057536,- | |id=chr4:38057520..38057536,- | ||
|ontology_enrichment_celltype=CL:0005020!1.92e-40!6;CL:0002138!1.92e-40!6;CL:0005022!1.92e-40!6;CL:0002144!6.80e-30!3;CL:0002139!5.28e-25!24;CL:0000115!7.49e-17!35;CL:0002078!3.32e-13!44;CL:0000213!5.76e-10!57;CL:0000215!5.76e-10!57 | |ontology_enrichment_celltype=CL:0005020!1.92e-40!6;CL:0002138!1.92e-40!6;CL:0005022!1.92e-40!6;CL:0002144!6.80e-30!3;CL:0002139!5.28e-25!24;CL:0000115!7.49e-17!35;CL:0002078!3.32e-13!44;CL:0000213!5.76e-10!57;CL:0000215!5.76e-10!57 | ||
|ontology_enrichment_celltype_v019=CL:0002144;4.55e-74;3!CL:0002138;4.90e-38;6!CL:0002139;3.17e-37;24!CL:0000115;7.76e-26;36!CL:0002078;4.99e-21;45!CL:0000071;4.64e-13;18!CL:0000213;9.02e-11;58!CL:0000215;9.02e-11;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,4.55e-74,3;CL:0005020,4.90e-38,6;CL:0002138,4.90e-38,6;CL:0005022,4.90e-38,6;CL:0002139,3.17e-37,24;CL:0000115,1.24e-33,36;CL:0002078,5.93e-27,45;CL:0000213,5.95e-21,58;CL:0000215,5.95e-21,58;CL:0000071,4.64e-13,18;CL:0002546,4.64e-13,18;CL:0000222,4.58e-10,121 | |||
|ontology_enrichment_development_v019=CL:0005022;4.90e-38;6!CL:0002546;4.64e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!1.37e-34!10;UBERON:0001473!2.40e-30!8;UBERON:0004536!2.40e-30!8;UBERON:0006558!2.40e-30!8;UBERON:0001915!6.80e-30!3;UBERON:0001982!6.80e-30!3;UBERON:0000029!4.58e-11!1;UBERON:0000055!3.60e-10!69;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0002046!1.93e-08!5;UBERON:0004117!1.93e-08!5;UBERON:0007689!1.93e-08!5;UBERON:0007123!1.93e-08!5;UBERON:0003091!1.93e-08!5;UBERON:0004535!2.66e-07!110;UBERON:0001009!4.55e-07!113 | |ontology_enrichment_uberon=UBERON:0002465!1.37e-34!10;UBERON:0001473!2.40e-30!8;UBERON:0004536!2.40e-30!8;UBERON:0006558!2.40e-30!8;UBERON:0001915!6.80e-30!3;UBERON:0001982!6.80e-30!3;UBERON:0000029!4.58e-11!1;UBERON:0000055!3.60e-10!69;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0002046!1.93e-08!5;UBERON:0004117!1.93e-08!5;UBERON:0007689!1.93e-08!5;UBERON:0007123!1.93e-08!5;UBERON:0003091!1.93e-08!5;UBERON:0004535!2.66e-07!110;UBERON:0001009!4.55e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;4.55e-74;3!UBERON:0001915;4.55e-74;3!UBERON:0001982;4.55e-74;3!UBERON:0002465;5.00e-40;10!UBERON:0001473;9.31e-29;8!UBERON:0004536;9.31e-29;8!UBERON:0006558;9.31e-29;8!UBERON:0000029;1.11e-25;1!UBERON:0002405;3.36e-15;27!UBERON:0004638;4.64e-13;18!UBERON:0001986;4.64e-13;18!UBERON:0004852;4.64e-13;18!UBERON:0000055;2.28e-11;65!UBERON:0000487;8.20e-11;22!UBERON:0002193;7.93e-10;42!UBERON:0006914;1.35e-09;25!UBERON:0002049;1.34e-08;75!UBERON:0007798;1.34e-08;75!UBERON:0000490;6.29e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.55e-74,3;UBERON:0001915,4.55e-74,3;UBERON:0001982,4.55e-74,3;UBERON:0002465,4.75e-40,10;UBERON:0001473,9.31e-29,8;UBERON:0004536,9.31e-29,8;UBERON:0006558,9.31e-29,8;UBERON:0000029,9.79e-26,1;UBERON:0000055,2.75e-13,68;UBERON:0004638,4.64e-13,18;UBERON:0001986,4.64e-13,18;UBERON:0004852,4.64e-13,18;UBERON:0002049,1.35e-11,78;UBERON:0007798,1.35e-11,78;UBERON:0000487,8.20e-11,22;UBERON:0006914,1.35e-09,25;UBERON:0004535,2.59e-08,109;UBERON:0001009,4.32e-08,112 | |||
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|short_description=p@chr4:38057520..38057536,- | |short_description=p@chr4:38057520..38057536,- | ||
}} | }} |
Latest revision as of 04:56, 30 July 2015
Short description: | p@chr4:38057520..38057536, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:38057520..38057536, - |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 4.55e-74 | 3 |
lymphangioblast | 4.90e-38 | 6 |
endothelial cell of lymphatic vessel | 4.90e-38 | 6 |
vascular lymphangioblast | 4.90e-38 | 6 |
endothelial cell of vascular tree | 3.17e-37 | 24 |
endothelial cell | 1.24e-33 | 36 |
meso-epithelial cell | 5.93e-27 | 45 |
lining cell | 5.95e-21 | 58 |
barrier cell | 5.95e-21 | 58 |
blood vessel endothelial cell | 4.64e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.64e-13 | 18 |
mesodermal cell | 4.58e-10 | 121 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.55e-74 | 3 |
endothelium of capillary | 4.55e-74 | 3 |
capillary | 4.55e-74 | 3 |
lymphoid system | 4.75e-40 | 10 |
lymphatic vessel | 9.31e-29 | 8 |
lymph vasculature | 9.31e-29 | 8 |
lymphatic part of lymphoid system | 9.31e-29 | 8 |
lymph node | 9.79e-26 | 1 |
vessel | 2.75e-13 | 68 |
blood vessel endothelium | 4.64e-13 | 18 |
endothelium | 4.64e-13 | 18 |
cardiovascular system endothelium | 4.64e-13 | 18 |
vasculature | 1.35e-11 | 78 |
vascular system | 1.35e-11 | 78 |
simple squamous epithelium | 8.20e-11 | 22 |
squamous epithelium | 1.35e-09 | 25 |
cardiovascular system | 2.59e-08 | 109 |
circulatory system | 4.32e-08 | 112 |