FFCP PHASE1:Hg19::chr4:66477239..66477243,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:66477239..66477243,- | |||
|description=CAGE_peak_at_chr4:66477239..66477243,- | |description=CAGE_peak_at_chr4:66477239..66477243,- | ||
|id=chr4:66477239..66477243,- | |id=chr4:66477239..66477243,- | ||
|ontology_enrichment_celltype=CL:1000306!2.45e-08!4;CL:0002547!2.45e-08!4 | |ontology_enrichment_celltype=CL:1000306!2.45e-08!4;CL:0002547!2.45e-08!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:154!2.38e-07!2;DOID:4236!2.38e-07!2;DOID:1115!4.81e-07!20 | |ontology_enrichment_disease=DOID:154!2.38e-07!2;DOID:4236!2.38e-07!2;DOID:1115!4.81e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.15e-29;1!DOID:4549;1.15e-29;1!DOID:5861;1.15e-29;1!DOID:6496;1.15e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.08e-10!82;UBERON:0006331!1.03e-09!3;UBERON:0000955!1.09e-09!69;UBERON:0006238!1.09e-09!69;UBERON:0000988!1.16e-09!3;UBERON:0005743!3.66e-09!86;UBERON:0001049!1.98e-08!57;UBERON:0005068!1.98e-08!57;UBERON:0006241!1.98e-08!57;UBERON:0007135!1.98e-08!57;UBERON:0000415!2.45e-08!4;UBERON:0007240!2.45e-08!4;UBERON:0005742!2.45e-08!4;UBERON:0005734!2.45e-08!4;UBERON:0004664!2.45e-08!4;UBERON:0004663!2.45e-08!4;UBERON:0002616!4.88e-08!59;UBERON:0000073!6.80e-08!94;UBERON:0001016!6.80e-08!94;UBERON:0002148!4.35e-07!2;UBERON:0009662!4.35e-07!2;UBERON:0002020!6.78e-07!34;UBERON:0003528!6.78e-07!34 | |ontology_enrichment_uberon=UBERON:0001017!8.08e-10!82;UBERON:0006331!1.03e-09!3;UBERON:0000955!1.09e-09!69;UBERON:0006238!1.09e-09!69;UBERON:0000988!1.16e-09!3;UBERON:0005743!3.66e-09!86;UBERON:0001049!1.98e-08!57;UBERON:0005068!1.98e-08!57;UBERON:0006241!1.98e-08!57;UBERON:0007135!1.98e-08!57;UBERON:0000415!2.45e-08!4;UBERON:0007240!2.45e-08!4;UBERON:0005742!2.45e-08!4;UBERON:0005734!2.45e-08!4;UBERON:0004664!2.45e-08!4;UBERON:0004663!2.45e-08!4;UBERON:0002616!4.88e-08!59;UBERON:0000073!6.80e-08!94;UBERON:0001016!6.80e-08!94;UBERON:0002148!4.35e-07!2;UBERON:0009662!4.35e-07!2;UBERON:0002020!6.78e-07!34;UBERON:0003528!6.78e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.15e-29;1!UBERON:0002418;7.78e-11;3!UBERON:0004755;7.78e-11;3!UBERON:0002114;7.78e-11;2!UBERON:0002369;1.09e-10;3!UBERON:0001235;1.09e-10;3!UBERON:0006858;1.09e-10;3!UBERON:0001474;2.60e-07;18!UBERON:0002108;5.23e-07;4!UBERON:0001872;5.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.99e-30,1;UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0002114,8.99e-11,2;UBERON:0002369,9.90e-11,3;UBERON:0001235,9.90e-11,3;UBERON:0006858,9.90e-11,3;UBERON:0001872,5.38e-07,5;UBERON:0002108,5.70e-07,4 | |||
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| ||
|short_description=p@chr4:66477239..66477243,- | |short_description=p@chr4:66477239..66477243,- | ||
}} | }} |
Latest revision as of 06:03, 30 July 2015
Short description: | p@chr4:66477239..66477243, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:66477239..66477243, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.99e-30 | 1 |
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
duodenum | 8.99e-11 | 2 |
adrenal gland | 9.90e-11 | 3 |
adrenal cortex | 9.90e-11 | 3 |
adrenal/interrenal gland | 9.90e-11 | 3 |
parietal lobe | 5.38e-07 | 5 |
small intestine | 5.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |