FFCP PHASE1:Hg19::chr4:77970141..77970143,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:77970141..77970143,+
|short_description=p@chr4:77970141..77970143,+
|description=CAGE_peak_at_chr4:77970141..77970143,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:77970141..77970143,+ | |||
|description=CAGE_peak_at_chr4:77970141..77970143,+ | |||
|id=chr4:77970141..77970143,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.38e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.70e-12;23!CL:0000511;2.49e-07;1!CL:0002625;2.49e-07;1!CL:0002568;2.49e-07;1!CL:0000216;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.81e-12,23;CL:0000057,9.96e-08,76;CL:0000511,1.83e-07,1;CL:0002625,1.83e-07,1;CL:0000216,1.83e-07,1;CL:0002568,3.20e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.53e-09;3!UBERON:0010227;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;9.08e-08;1!DOID:3571;2.49e-07;1!DOID:2394;2.98e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,8.00e-08,1;DOID:3571,2.35e-07,1;DOID:2394,2.89e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.10e-09!32;UBERON:0000955!1.72e-09!69;UBERON:0006238!1.72e-09!69;UBERON:0001049!2.01e-09!57;UBERON:0005068!2.01e-09!57;UBERON:0006241!2.01e-09!57;UBERON:0007135!2.01e-09!57;UBERON:0001893!3.44e-09!34;UBERON:0001017!7.96e-09!82;UBERON:0002020!8.03e-09!34;UBERON:0003528!8.03e-09!34;UBERON:0002791!9.51e-09!33;UBERON:0000073!1.38e-08!94;UBERON:0001016!1.38e-08!94;UBERON:0000956!2.35e-08!25;UBERON:0000203!2.35e-08!25;UBERON:0001950!7.99e-08!20;UBERON:0002616!8.85e-08!59;UBERON:0005743!1.09e-07!86;UBERON:0002780!2.99e-07!41;UBERON:0001890!2.99e-07!41;UBERON:0006240!2.99e-07!41;UBERON:0002619!3.15e-07!22;UBERON:0003080!7.41e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.49e-07;1!UBERON:0003112;2.49e-07;1!UBERON:0001136;2.49e-07;1!UBERON:0001343;2.49e-07;1!UBERON:0011158;2.49e-07;1!UBERON:0004910;2.49e-07;1!UBERON:0004813;2.49e-07;1!UBERON:0003128;2.49e-07;1!UBERON:0001703;2.49e-07;1!UBERON:0002241;2.49e-07;1!UBERON:0001950;5.88e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,1.51e-07,1;UBERON:0011158,1.51e-07,1;UBERON:0003128,1.51e-07,1;UBERON:0001703,1.51e-07,1;UBERON:0002241,1.51e-07,1;UBERON:0004761,1.51e-07,1;UBERON:0009617,1.51e-07,1;UBERON:0001136,1.83e-07,1;UBERON:0001343,1.83e-07,1;UBERON:0004910,1.83e-07,1;UBERON:0005154,1.83e-07,1;UBERON:0005295,1.83e-07,1;UBERON:0004813,1.83e-07,1;UBERON:0005297,1.83e-07,1;UBERON:0005294,1.83e-07,1;UBERON:0010141,1.83e-07,1;UBERON:0005891,1.83e-07,1;UBERON:0002079,2.66e-07,1;UBERON:0001950,4.58e-07,20 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0.305653622991805,0.246301768349837,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0.473554504088034,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,2.48485975847659,0.12663051166458,0.397227542439656,1.43418310374407,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.647491777472526,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0,0,1.79389635688862,0.85422955527427,0.635795703478686,0.600182192168805,0.721367704669072,1.54584324027377,0.930584281657949,2.86919764810153,0.68205903612839,2.01947019395292,1.01254888506529,0.484938170456436,2.84007674013291,1.10827308050404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,1.16344544182,0,0.845302752556,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0,0,0.448340575974109,0.197030760201927,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.630809660135739,0.468565659970853,0.300946099727719,0,0,0,0,0.695068915744663,0,0,0,0,0.106727557803444,0,0,0,0.496215615637554,2.455391572609,0,0.256278298511402,0,1.44768529029247,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0.219259876645935,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0.551346289938122,0.107420244868274,0.145016693914229,0.255679882248303,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0,1.25924938732256,0,0,0,0,0,0.715624433709956,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0.54907405947211,0.353437207037059,0,0,0,0,0.243713489631284,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0.648473311192717,1.08006287447623,0,0.213648142254946,0,0,0,0,0.569134746787313,0.159426272728822,0,0,0,0.324621940274555,0.280797178113459,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0.307240764308458,0,0.333698283423817,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0.994147647766298,1.54736358051564,0,0,1.05562704063997,0.19924798825107,0,0,0.409074730008619,0.123084805461069,0.311039587661807,0.269605053441981,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.463840490809256,0,0.7812832832557,0.0874599999961957,0,0.1137934482855,0.508507300585533,0,0.689486746482929,0.583209226766509,0.347249989866585,0,0.723578631752448,3.05163472634166,1.21637185924347,0.886642856860642,0,0.10893846351899,0,0.538651809526579,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0.183195186803725,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0.141353071433941,0.432777279484182,0,0.176915129006678,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0.468528891450678,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0.411125773940253,0.19871461170299,0.823040347426423,0,0.0801588202515337,0,0.19980960958213,0,0.229073192331831,0.686379991447858,0,0.124252535565433,0.235694034616795,0.271808412147228,0.313808538937,0.203996435272644,0.288950589901519,0,0.410716136675979,0,0.859530882839914,0,0,0.687481272035051,0.717873024576814,0.199679000498991,0.429226048136571,0,0,1.44119953416961,0,0.0787831823072236,0.164831716762333,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.2249738915515,0,0.364497339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| ||
|short_description=p@chr4:77970141..77970143,+ | |||
}} | }} |
Latest revision as of 07:03, 30 July 2015
Short description: | p@chr4:77970141..77970143, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77970141..77970143, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.81e-12 | 23 |
fibroblast | 9.96e-08 | 76 |
androgen binding protein secreting cell | 1.83e-07 | 1 |
seminiferous tubule epithelial cell | 1.83e-07 | 1 |
Sertoli cell | 1.83e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
olfactory region | 1.51e-07 | 1 |
primary subdivision of skull | 1.51e-07 | 1 |
cranium | 1.51e-07 | 1 |
neurocranium | 1.51e-07 | 1 |
chondrocranium | 1.51e-07 | 1 |
cartilaginous neurocranium | 1.51e-07 | 1 |
head paraxial mesoderm | 1.51e-07 | 1 |
mesothelium | 1.83e-07 | 1 |
seminiferous tubule of testis | 1.83e-07 | 1 |
epithelium of male gonad | 1.83e-07 | 1 |
epithelial cord | 1.83e-07 | 1 |
sex cord | 1.83e-07 | 1 |
seminiferous tubule epithelium | 1.83e-07 | 1 |
testis sex cord | 1.83e-07 | 1 |
genital ridge | 1.83e-07 | 1 |
primitive sex cord of indifferent gonad | 1.83e-07 | 1 |
coelomic epithelium | 1.83e-07 | 1 |
left cardiac atrium | 2.66e-07 | 1 |
neocortex | 4.58e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 8.00e-08 | 1 |
liver cancer | 2.35e-07 | 1 |
ovarian cancer | 2.89e-07 | 14 |