FFCP PHASE1:Hg19::chr5:124298657..124298672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:124298657..124298672,+ | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_at_chr5:124298657..124298672,+ | |description=CAGE_peak_at_chr5:124298657..124298672,+ | ||
|id=chr5:124298657..124298672,+ | |id=chr5:124298657..124298672,+ | ||
|ontology_enrichment_celltype=CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6 | |ontology_enrichment_celltype=CL:0002322!8.17e-09!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6 | ||
|ontology_enrichment_disease=DOID:3001;1.50e-09;6 | |ontology_enrichment_celltype_v019_2=CL:0002149,1.44e-09,6;CL:0002255,1.44e-09,6 | ||
|ontology_enrichment_uberon=UBERON:0001905;8.10e-26;2!UBERON:0002757;8.10e-26;2!UBERON:0010134;8.10e-26;2!UBERON:0005408;8.10e-26;2!UBERON:0001899;8.10e-26;2!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0002784;1.21e-13;4!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0001894;2.26e-08;7 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050619!1.45e-11!1;DOID:1357!1.45e-11!1;DOID:12603!2.18e-11!1;DOID:3112!2.68e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.42e-20!8;UBERON:0003135!1.10e-14!11;UBERON:0001764!1.45e-11!1;UBERON:0001825!1.45e-11!1;UBERON:0002336!5.43e-11!1;UBERON:0001018!5.43e-11!1;UBERON:0002473!5.43e-11!1;UBERON:0005340!5.43e-11!1;UBERON:0002316!5.43e-11!1;UBERON:0003544!5.43e-11!1;UBERON:0001020!5.43e-11!1;UBERON:0005970!5.43e-11!1;UBERON:0002437!5.43e-11!1;UBERON:0000991!8.72e-08!21;UBERON:0009196!8.72e-08!21;UBERON:0009117!8.72e-08!21;UBERON:0005564!8.72e-08!21;UBERON:0004176!1.94e-07!22;UBERON:0003101!1.94e-07!22;UBERON:0000079!1.94e-07!22;UBERON:0003133!4.65e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.10e-26;2!UBERON:0002757;8.10e-26;2!UBERON:0010134;8.10e-26;2!UBERON:0005408;8.10e-26;2!UBERON:0001899;8.10e-26;2!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0002784;1.21e-13;4!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0001894;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
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|short_description=p@chr5:124298657..124298672,+ | |short_description=p@chr5:124298657..124298672,+ | ||
}} | }} |
Latest revision as of 09:14, 30 July 2015
Short description: | p@chr5:124298657..124298672, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:124298657..124298672, + |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.44e-09 | 6 |
stromal cell of endometrium | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.44e-09 | 6 |